@prefix SecondaryFileSchema: .
@prefix rdf: .
@prefix CommandLineBinding: .
@prefix xsd: .
@prefix DockerRequirement: .
@prefix cwl: .
@prefix Workflow: .
@prefix sld: .
@prefix CommandOutputBinding: .
@prefix ns1: .
cwl:outputSource ;
sld:type cwl:File .
cwl:source .
cwl:source .
sld:type cwl:File .
a cwl:File .
a cwl:Workflow ;
ns1:original_cwlVersion "v1.1" ;
Workflow:steps , ;
cwl:cwlVersion ;
cwl:inputs , , ;
cwl:outputs , .
cwl:source .
a cwl:File .
cwl:outputSource ;
sld:type cwl:File .
cwl:inputBinding [ CommandLineBinding:position
2 ] ;
sld:type xsd:string .
a cwl:CommandLineTool ;
ns1:original_cwlVersion "v1.1" ;
cwl:baseCommand ( "python" ) ;
cwl:cwlVersion ;
cwl:hints [ a cwl:DockerRequirement ;
DockerRequirement:dockerPull "python:2-slim"
] ;
cwl:inputs , , ;
cwl:outputs ;
cwl:requirements [ a cwl:InlineJavascriptRequirement ] ;
cwl:stdout "result.txt" .
cwl:outputBinding [ CommandOutputBinding:glob
"input.txt" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"$(self.basename).idx3" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"${ return [self.basename+\".idx7\", inputs.secondfile]; }" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"^.idx2" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
".idx1" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"${ return self.basename+\".idx4\"; }" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"$(self.nameroot).idx6$(self.nameext)" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"$({\"path\": self.path+\".idx5\", \"class\": \"File\"})" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"_idx8" ] ;
sld:type cwl:File .
cwl:in , ;
cwl:out ;
cwl:run .
cwl:inputBinding [ CommandLineBinding:position
0 ] ;
sld:default ;
sld:type cwl:File .
sld:type cwl:File .
sld:type cwl:File .
sld:type xsd:string .
cwl:inputBinding [ CommandLineBinding:position
1 ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"$(self.basename).idx3" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"_idx8" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"^.idx2" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"$(self.nameroot).idx6$(self.nameext)" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"${ return [self.basename+\".idx7\"]; }" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
".idx1" ] ;
cwl:secondaryFiles [ SecondaryFileSchema:pattern
"${ return self.basename+\".idx4\"; }" ] ;
sld:type cwl:File .
a cwl:CommandLineTool ;
ns1:original_cwlVersion "v1.1" ;
cwl:arguments ( [ CommandLineBinding:position 1 ;
cwl:valueFrom "input.txt"
]
) ;
cwl:baseCommand ( "python" ) ;
cwl:cwlVersion ;
cwl:hints [ a cwl:DockerRequirement ;
DockerRequirement:dockerPull "python:2-slim"
] ;
cwl:inputs , , ;
cwl:outputs ;
cwl:requirements [ a cwl:InlineJavascriptRequirement ] ;
cwl:requirements [ a cwl:InitialWorkDirRequirement ;
cwl:listing [ cwl:entry "$(inputs.file)" ;
cwl:entryname "input.txt"
]
] .
cwl:outputBinding [ CommandOutputBinding:glob
"result.txt" ] ;
sld:type cwl:File .
cwl:in , ;
cwl:out ;
cwl:run .
cwl:source .
sld:type cwl:File .
cwl:inputBinding [ CommandLineBinding:position
0 ] ;
sld:default ;
sld:type cwl:File .