@prefix InplaceUpdateRequirement: .
@prefix rdf: .
@prefix CommandLineBinding: .
@prefix xsd: .
@prefix DockerRequirement: .
@prefix Dirent: .
@prefix Workflow: .
@prefix cwl: .
@prefix sld: .
@prefix CommandOutputBinding: .
@prefix ns1: .
@prefix ExpressionTool: .
cwl:inputBinding [ CommandLineBinding:position
1 ] ;
sld:type xsd:string .
cwl:in , ;
cwl:out ;
cwl:run .
cwl:outputSource ;
sld:type xsd:int .
sld:type xsd:string , sld:null .
sld:default ;
sld:type cwl:File .
cwl:in ;
cwl:out ;
cwl:run .
cwl:outputBinding [ CommandOutputBinding:glob
"out.txt" ] ;
sld:type cwl:File .
cwl:outputSource ;
sld:type xsd:int .
sld:default "3" .
cwl:source .
cwl:in ;
cwl:out ;
cwl:run .
sld:type xsd:int .
a cwl:ExpressionTool ;
ns1:original_cwlVersion "v1.2" ;
ExpressionTool:expression "$({'output': parseInt(inputs.file1.contents)})" ;
cwl:cwlVersion ;
cwl:inputs ;
cwl:outputs ;
cwl:requirements [ a cwl:InlineJavascriptRequirement ] ;
cwl:requirements [ a cwl:InlineJavascriptRequirement ] .
cwl:in ;
cwl:out ;
cwl:run .
a cwl:CommandLineTool ;
ns1:original_cwlVersion "v1.1" ;
cwl:arguments ( "python" "$(inputs.script)" "$(inputs.r.basename)" ) ;
cwl:cwlVersion ;
cwl:hints [ a cwl:DockerRequirement ;
DockerRequirement:dockerPull "python:2.7.15-alpine3.7"
] ;
cwl:inputs , ;
cwl:outputs ;
cwl:requirements [ a cwl:InitialWorkDirRequirement ;
cwl:listing [ Dirent:writable true ;
cwl:entry "$(inputs.r)"
]
] ;
cwl:requirements [ a cwl:InplaceUpdateRequirement ;
InplaceUpdateRequirement:inplaceUpdate
true
] .
a cwl:CommandLineTool ;
ns1:original_cwlVersion "v1.1" ;
cwl:baseCommand ( "echo" ) ;
cwl:cwlVersion ;
cwl:inputs , ;
cwl:outputs ;
cwl:stdout "out.txt" .
sld:type cwl:File .
cwl:outputBinding [ CommandOutputBinding:glob
"$(inputs.r.basename)" ] ;
sld:type cwl:File .
cwl:source .
a cwl:File .
cwl:source .
a cwl:Workflow ;
ns1:original_cwlVersion "v1.1" ;
Workflow:steps , , , ;
cwl:cwlVersion ;
cwl:outputs , .
cwl:inputBinding [ cwl:loadContents true ] ;
cwl:inputBinding [ cwl:loadContents true ] ;
sld:type cwl:File .
cwl:source .