digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 563 233 563 0 ",
		bb="0,0,563,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 555 225 555 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,555,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		mills	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 57.5 197.5 57.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 37 185.5 0 25 5 -mills ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mills,
			pos="37,188",
			rects="16.5,178.5,57.5,197.5",
			width=0.56944];
		known_indels	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 61.5 178.5 61.5 197.5 144.5 197.5 144.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 103 185.5 0 67 12 -known_indels ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=known_indels,
			pos="103,188",
			rects="61.5,178.5,144.5,197.5",
			width=1.1528];
		downsample_probability	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 148.5 178.5 148.5 197.5 285.5 197.5 285.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 217 185.5 0 121 22 -downsample_probability ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_probability,
			pos="217,188",
			rects="148.5,178.5,285.5,197.5",
			width=1.9028];
		readgroups	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 405.5 178.5 405.5 197.5 476.5 197.5 476.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 441 185.5 0 55 10 -readgroups ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=readgroups,
			pos="441,188",
			rects="405.5,178.5,476.5,197.5",
			width=0.98611];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 338.5 178.5 338.5 197.5 401.5 197.5 401.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 370 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="370,188",
			rects="338.5,178.5,401.5,197.5",
			width=0.875];
		bams	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 290 178.5 290 197.5 334 197.5 334 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 312 185.5 0 28 4 -bams ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bams,
			pos="312,188",
			rects="290,178.5,334,197.5",
			width=0.61111];
		dbsnp_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 481 178.5 481 197.5 547 197.5 547 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 514 185.5 0 50 9 -dbsnp_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=dbsnp_vcf,
			pos="514,188",
			rects="481,178.5,547,197.5",
			width=0.91667];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 215 8 215 63 433 63 433 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 269 15 0 92 16 -Workflow Outputs ",
			bb="215,8,433,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="269,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		mark_duplicates_metrics_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 223 35.5 223 54.5 383 54.5 383 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 303 42.5 0 144 28 -mark_duplicates_metrics_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mark_duplicates_metrics_file,
			pos="303,45",
			rects="223,35.5,383,54.5",
			width=2.2222];
		bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 387 35.5 387 54.5 425 54.5 425 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 406 42.5 0 22 3 -bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bam,
			pos="406,45",
			rects="387,35.5,425,54.5",
			width=0.52778];
	}
	align_workflow	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 265 80.5 265 99.5 443 99.5 443 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 354 87.5 0 162 29 -Unaligned BAM to BQSR and VCF ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Unaligned BAM to BQSR and VCF",
		pos="354,90",
		rects="265,80.5,443,99.5",
		width=2.4722];
	mills -> align_workflow	[_draw_="c 7 -#000000 B 10 44.37 178.85 56.8 165.58 83.33 139.35 111 125 137.13 111.45 146.03 113.19 175 108 201.45 103.26 230.36 99.79 257.08 \
97.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 257.04 99.73 263.79 96.65 256.59 94.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 120.5 133.1 0 19 5 -mills ",
		label=mills,
		lp="120.5,135",
		pos="e,265.29,96.513 44.366,178.85 56.802,165.58 83.327,139.35 111,125 137.13,111.45 146.03,113.19 175,108 201.45,103.26 230.36,99.79 \
257.08,97.266"];
	known_indels -> align_workflow	[_draw_="c 7 -#000000 B 7 107.45 178.55 115.16 164.84 132.34 138.01 155 125 173.42 114.43 219 106.25 261.89 100.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 262.01 103.01 268.64 99.69 261.38 98.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 183 133.1 0 56 12 -known_indels ",
		label=known_indels,
		lp="183,135",
		pos="e,270.14,99.492 107.45,178.55 115.16,164.84 132.34,138.01 155,125 173.42,114.43 219,106.25 261.89,100.56"];
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 212.5 125.5 212.5 144.5 367.5 144.5 367.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 290 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="290,135",
		rects="212.5,125.5,367.5,144.5",
		width=2.1528];
	downsample_probability -> downsample	[_draw_="c 7 -#000000 B 7 224.1 178.6 230.73 171.14 241.2 160.32 252 153 254.54 151.28 257.29 149.66 260.1 148.15 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 261.05 150.42 266.24 145.13 258.88 146.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 274 155.6 0 44 11 -probability ",
		label=probability,
		lp="274,157.5",
		pos="e,267.6,144.46 224.1,178.6 230.73,171.14 241.2,160.32 252,153 254.54,151.28 257.29,149.66 260.1,148.15"];
	readgroups -> align_workflow	[_draw_="c 7 -#000000 B 7 438.74 178.9 434.86 166.15 425.87 141.22 411 125 402.87 116.13 391.9 108.84 381.74 103.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 382.9 101.16 375.55 100.13 380.66 105.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 448 133.1 0 48 10 -readgroups ",
		label=readgroups,
		lp="448,135",
		pos="e,374.2,99.443 438.74,178.9 434.86,166.15 425.87,141.22 411,125 402.87,116.13 391.9,108.84 381.74,103.32"];
	reference -> downsample	[_draw_="c 7 -#000000 B 7 357.58 178.81 344.72 170.34 325.48 157.72 318 153 315.74 151.57 313.36 150.1 310.99 148.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 312.56 146.73 305.31 145.17 310.01 150.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 351 155.6 0 40 9 -reference ",
		label=reference,
		lp="351,157.5",
		pos="e,304.01,144.38 357.58,178.81 344.72,170.34 325.48,157.72 318,153 315.74,151.57 313.36,150.1 310.99,148.64"];
	reference -> align_workflow	[_draw_="c 7 -#000000 B 7 370.66 178.86 371.42 166.9 372.1 143.95 368 125 366.68 118.88 364.31 112.46 361.9 106.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 364.24 106.09 359.08 100.77 359.79 108.15 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 390 133.1 0 40 9 -reference ",
		label=reference,
		lp="390,135",
		pos="e,358.44,99.392 370.66,178.86 371.42,166.9 372.1,143.95 368,125 366.68,118.88 364.31,112.46 361.9,106.86"];
	bams -> downsample	[_draw_="c 7 -#000000 B 4 308.37 178.58 305.26 171.37 300.7 160.81 296.9 152 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 299.19 151.11 294.16 145.65 294.69 153.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 310.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="310.5,157.5",
		pos="e,293.57,144.26 308.37,178.58 305.26,171.37 300.7,160.81 296.9,152"];
	dbsnp_vcf -> align_workflow	[_draw_="c 7 -#000000 B 7 510.82 178.81 505.23 165.49 492.36 139.19 473 125 458.12 114.1 439.84 106.68 422.11 101.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 422.87 99.31 415.48 99.88 421.61 104.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 512 133.1 0 42 9 -dbsnp_vcf ",
		label=dbsnp_vcf,
		lp="512,135",
		pos="e,414.01,99.491 510.82,178.81 505.23,165.49 492.36,139.19 473,125 458.12,114.1 439.84,106.68 422.11,101.64"];
	downsample -> align_workflow	[_draw_="c 7 -#000000 B 4 302.64 125.5 311.76 119.38 324.23 111 334.61 104.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 335.68 106.26 340.13 100.32 332.95 102.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 338.5 110.6 0 23 4 -bams ",
		label=bams,
		lp="338.5,112.5",
		pos="e,341.38,99.478 302.64,125.5 311.76,119.38 324.23,111 334.61,104.03"];
	align_workflow -> mark_duplicates_metrics_file	[_draw_="c 7 -#000000 B 4 344.17 80.71 337.11 74.76 327.44 66.61 319.25 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 320.89 57.88 313.96 55.24 317.73 61.63 ",
		pos="e,312.8,54.265 344.17,80.709 337.11,74.76 327.44,66.609 319.25,59.701"];
	align_workflow -> bam	[_draw_="c 7 -#000000 B 4 364.27 80.5 371.4 74.62 381.04 66.64 389.26 59.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 390.75 61.79 394.58 55.44 387.63 58.02 ",
		pos="e,395.75,54.478 364.27,80.505 371.4,74.615 381.04,66.64 389.26,59.841"];
}