digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 287 323 287 0 ",
		bb="0,0,287,323",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 260 8 315 279 315 279 260 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 303 0 84 15 -Workflow Inputs ",
			bb="8,260,279,315",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,305.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 268.5 16.5 287.5 79.5 287.5 79.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 48 275.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="48,278",
			rects="16.5,268.5,79.5,287.5",
			width=0.875];
		cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 83.5 268.5 83.5 287.5 124.5 287.5 124.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 104 275.5 0 25 4 -cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=cram,
			pos="104,278",
			rects="83.5,268.5,124.5,287.5",
			width=0.56944];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 129 268.5 129 287.5 203 287.5 203 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 166 275.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="166,278",
			rects="129,268.5,203,287.5",
			width=1.0278];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 207 268.5 207 287.5 271 287.5 271 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 239 275.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="239,278",
			rects="207,268.5,271,287.5",
			width=0.88889];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 60 8 60 63 235 63 235 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 114 15 0 92 16 -Workflow Outputs ",
			bb="60,8,235,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="114,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 155.5 35.5 155.5 54.5 226.5 54.5 226.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 191 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="191,45",
			rects="155.5,35.5,226.5,54.5",
			width=0.98611];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 68.5 35.5 68.5 54.5 151.5 54.5 151.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 110 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="110,45",
			rects="68.5,35.5,151.5,54.5",
			width=1.1528];
	}
	gatk_haplotypecaller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 60 215.5 60 234.5 210 234.5 210 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 135 222.5 0 134 26 -HaplotypeCaller (GATK 3.6) ",
		height=0.27778,
		label="HaplotypeCaller (GATK 3.6)",
		pos="135,225",
		rects="60,215.5,210,234.5",
		width=2.0833];
	reference -> gatk_haplotypecaller	[_draw_="c 7 -#000000 B 7 53.42 268.52 58.78 260.79 67.65 249.61 78 243 81.17 240.97 84.59 239.18 88.13 237.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 89.01 239.88 94.6 235.01 87.19 235.33 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 98 245.6 0 40 9 -reference ",
		label=reference,
		lp="98,247.5",
		pos="e,96.003,234.44 53.42,268.52 58.777,260.79 67.653,249.61 78,243 81.169,240.97 84.59,239.18 88.127,237.59"];
	cram -> gatk_haplotypecaller	[_draw_="c 7 -#000000 B 4 109.12 268.58 113.59 261.23 120.19 250.37 125.6 241.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 127.65 242.81 129.19 235.56 123.46 240.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 134.5 245.6 0 21 4 -cram ",
		label=cram,
		lp="134.5,247.5",
		pos="e,129.98,234.26 109.12,268.58 113.59,261.23 120.19,250.37 125.6,241.46"];
	interval_list -> gatk_haplotypecaller	[_draw_="c 7 -#000000 B 7 161.17 268.56 157.18 261.64 151.32 251.62 146 243 145.67 242.46 145.33 241.91 144.98 241.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 147.09 240.11 141.26 235.53 142.96 242.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 174.5 245.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="174.5,247.5",
		pos="e,140.44,234.26 161.17,268.56 157.18,261.64 151.32,251.62 146,243 145.67,242.46 145.33,241.91 144.98,241.36"];
	docm_vcf -> gatk_haplotypecaller	[_draw_="c 7 -#000000 B 7 231.22 268.51 223.7 260.78 211.6 249.59 199 243 194.76 240.78 190.2 238.83 185.55 237.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 186.51 234.87 179.1 234.96 184.95 239.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 231.5 245.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="231.5,247.5",
		pos="e,177.66,234.48 231.22,268.51 223.7,260.78 211.6,249.59 199,243 194.76,240.78 190.2,238.83 185.55,237.13"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 145.5 125.5 145.5 144.5 210.5 144.5 210.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 178 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="178,135",
		rects="145.5,125.5,210.5,144.5",
		width=0.90278];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 158 80.5 158 99.5 220 99.5 220 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 189 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="189,90",
		rects="158,80.5,220,99.5",
		width=0.86111];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 180.12 125.71 181.46 120.47 183.24 113.53 184.85 107.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 187.15 108.12 186.51 100.73 182.4 106.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 190.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="190.5,112.5",
		pos="e,186.89,99.265 180.12,125.71 181.46,120.47 183.24,113.53 184.85,107.24"];
	index -> filtered_vcf	[_draw_="c 7 -#000000 B 4 189.39 80.71 189.62 75.59 189.94 68.85 190.22 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 192.67 62.88 190.55 55.78 187.77 62.66 ",
		pos="e,190.62,54.265 189.39,80.709 189.62,75.593 189.94,68.848 190.22,62.666"];
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 138.5 170.5 138.5 189.5 207.5 189.5 207.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 173 177.5 0 53 11 -docm filter ",
		height=0.27778,
		label="docm filter",
		pos="173,180",
		rects="138.5,170.5,207.5,189.5",
		width=0.95833];
	docm_filter -> bgzip	[_draw_="c 7 -#000000 B 4 173.96 170.71 174.56 165.59 175.34 158.85 176.06 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 178.49 153 176.86 145.77 173.62 152.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 181.5 155.6 0 13 4 -file ",
		label=file,
		lp="181.5,157.5",
		pos="e,177.04,144.27 173.96,170.71 174.56,165.59 175.34,158.85 176.06,152.67"];
	gatk_haplotypecaller -> unfiltered_vcf	[_draw_="c 7 -#000000 B 10 133.17 215.8 131.4 207.19 129 193.21 129 181 129 181 129 181 129 89 129 79.33 124.93 69.4 120.56 61.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 122.75 60.4 117.01 55.7 118.56 62.95 ",
		pos="e,116.22,54.411 133.17,215.8 131.4,207.19 129,193.21 129,181 129,181 129,181 129,89 129,79.329 124.93,69.397 120.56,61.519"];
	gatk_haplotypecaller -> docm_filter	[_draw_="c 7 -#000000 B 4 142.33 215.71 147.37 210 154.21 202.26 160.15 195.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 161.89 197.27 164.69 190.4 158.22 194.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 177 200.6 0 40 8 -docm_out ",
		label=docm_out,
		lp="177,202.5",
		pos="e,165.7,189.27 142.33,215.71 147.37,210 154.21,202.26 160.15,195.54"];
}