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		filter_somatic_llr_threshold	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 3148.5 673.5 3148.5 692.5 3297.5 692.5 3297.5 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3223 680.5 0 133 28 -filter_somatic_llr_threshold ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filter_somatic_llr_threshold,
			pos="3223,683",
			rects="3148.5,673.5,3297.5,692.5",
			width=2.0694];
		annotate_coding_only	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2486 673.5 2486 692.5 2610 692.5 2610 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2548 680.5 0 108 20 -annotate_coding_only ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=annotate_coding_only,
			pos="2548,683",
			rects="2486,673.5,2610,692.5",
			width=1.7222];
		vep_pick	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1559 673.5 1559 692.5 1619 692.5 1619 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1589 680.5 0 44 8 -vep_pick ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=vep_pick,
			pos="1589,683",
			rects="1559,673.5,1619,692.5",
			width=0.83333];
		pindel_insert_size	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 941 673.5 941 692.5 1045 692.5 1045 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 993 680.5 0 88 18 -pindel_insert_size ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=pindel_insert_size,
			pos="993,683",
			rects="941,673.5,1045,692.5",
			width=1.4444];
	}
	normal_bam_readcount	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1592 395.5 1592 414.5 1702 414.5 1702 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1647 402.5 0 94 17 -run bam-readcount ",
		height=0.27778,
		label="run bam-readcount",
		pos="1647,405",
		rects="1592,395.5,1702,414.5",
		width=1.5278];
	readcount_minimum_mapping_quality -> normal_bam_readcount	[_draw_="c 7 -#000000 B 22 2195.61 673.54 2158.47 666.15 2104.8 654.35 2059 640 2027.03 629.98 2018.56 627.77 1989 612 1984.31 609.5 1915 \
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1684.54 421.21 1681.86 419.55 1679.09 418.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1680.36 415.94 1673 415.05 1678.2 420.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1871.5 538.1 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="1871.5,540",
		pos="e,1671.6,414.39 2195.6,673.54 2158.5,666.15 2104.8,654.35 2059,640 2027,629.98 2018.6,627.77 1989,612 1984.3,609.5 1915,559.82 1910,\
558 1875.6,545.5 1861.8,564.05 1828,550 1813.5,543.97 1730.2,470.98 1719,460 1703.5,444.8 1704.6,435.81 1687,423 1684.5,421.21 1681.9,\
419.55 1679.1,418.05"];
	tumor_bam_readcount	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1995 395.5 1995 414.5 2105 414.5 2105 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2050 402.5 0 94 17 -run bam-readcount ",
		height=0.27778,
		label="run bam-readcount",
		pos="2050,405",
		rects="1995,395.5,2105,414.5",
		width=1.5278];
	readcount_minimum_mapping_quality -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 16 2224.92 673.54 2211.57 665.98 2192.62 653.95 2179 640 2168.67 629.41 2168.06 625 2161 612 2127.48 550.3 2152.19 \
510.11 2096 468 2075.53 452.66 2055.78 479.31 2039 460 2029.92 449.56 2034.61 433.68 2040.41 421.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2042.54 423.06 2043.72 415.74 2038.23 420.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2183.5 538.1 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="2183.5,540",
		pos="e,2044.4,414.41 2224.9,673.54 2211.6,665.98 2192.6,653.95 2179,640 2168.7,629.41 2168.1,625 2161,612 2127.5,550.3 2152.2,510.11 \
2096,468 2075.5,452.66 2055.8,479.31 2039,460 2029.9,449.56 2034.6,433.68 2040.4,421.84"];
	annotate_variants	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1851.5 440.5 1851.5 459.5 2024.5 459.5 2024.5 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1938 447.5 0 157 32 -Ensembl Variant Effect Predictor ",
		height=0.27778,
		label="Ensembl Variant Effect Predictor",
		pos="1938,450",
		rects="1851.5,440.5,2024.5,459.5",
		width=2.4028];
	vep_ensembl_version -> annotate_variants	[_draw_="c 7 -#000000 B 13 1902.96 673.74 1903.36 651.19 1907.79 588.22 1944 558 1963.64 541.61 1984.22 569.31 2001 550 2012.96 536.25 2012.08 \
482.47 2001 468 1999.99 466.68 1998.89 465.46 1997.72 464.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1999.51 462.62 1992.47 460.3 1996.53 466.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1979 560.6 0 70 15 -ensembl_version ",
		label=ensembl_version,
		lp="1979,562.5",
		pos="e,1991.3,459.38 1903,673.74 1903.4,651.19 1907.8,588.22 1944,558 1963.6,541.61 1984.2,569.31 2001,550 2013,536.25 2012.1,482.47 \
2001,468 2000,466.68 1998.9,465.46 1997.7,464.33"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2503.5 72.5 2503.5 91.5 2644.5 91.5 2644.5 72.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2574 79.5 0 125 25 -SelectVariants (GATK 3.6) ",
		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="2574,82",
		rects="2503.5,72.5,2644.5,91.5",
		width=1.9583];
	reference -> variants_to_table	[_draw_="c 7 -#000000 B 34 1422.22 673.66 1428.65 670.32 1436.48 666.84 1444 665 1489.58 653.87 1608.19 660.22 1655 657 1819.38 645.68 1864.24 \
656.11 2023 612 2072.31 598.3 2093.98 604.32 2129 567 2140.93 554.29 2130.33 542.95 2142 530 2166.36 502.97 2259.34 479.58 2290 \
460 2301.7 452.53 2301.74 446.52 2314 440 2349.14 421.31 2362.44 428.17 2400 415 2489.01 383.79 2574 387.82 2574 293.5 2574 293.5 \
2574 293.5 2574 134 2574 122.59 2574 109.75 2574 99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2576.45 99.82 2574 92.82 2571.55 99.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2539 380.6 0 40 9 -reference ",
		label=reference,
		lp="2539,382.5",
		pos="e,2574,91.304 1422.2,673.66 1428.6,670.32 1436.5,666.84 1444,665 1489.6,653.87 1608.2,660.22 1655,657 1819.4,645.68 1864.2,656.11 \
2023,612 2072.3,598.3 2094,604.32 2129,567 2140.9,554.29 2130.3,542.95 2142,530 2166.4,502.97 2259.3,479.58 2290,460 2301.7,452.53 \
2301.7,446.52 2314,440 2349.1,421.31 2362.4,428.17 2400,415 2489,383.79 2574,387.82 2574,293.5 2574,293.5 2574,293.5 2574,134 2574,\
122.59 2574,109.75 2574,99.808"];
	varscan	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 395.5 620.5 395.5 639.5 498.5 639.5 498.5 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 447 627.5 0 87 16 -Varscan Workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Varscan Workflow",
		pos="447,630",
		rects="395.5,620.5,498.5,639.5",
		width=1.4306];
	reference -> varscan	[_draw_="c 7 -#000000 B 13 1394.22 673.58 1387.98 670.22 1380.36 666.75 1373 665 1344.51 658.22 872.62 669.2 846 657 841.13 654.77 842.83 \
650.3 838 648 808.94 634.18 608.81 631.51 506.68 631.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 506.83 628.6 499.82 631.02 506.81 633.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 866 650.6 0 40 9 -reference ",
		label=reference,
		lp="866,652.5",
		pos="e,498.31,631.01 1394.2,673.58 1388,670.22 1380.4,666.75 1373,665 1344.5,658.22 872.62,669.2 846,657 841.13,654.77 842.83,650.3 838,\
648 808.94,634.18 608.81,631.51 506.68,631.05"];
	filter_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2366 215.5 2366 234.5 2494 234.5 2494 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2430 222.5 0 112 25 -Apply filters to VCF file ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Apply filters to VCF file",
		pos="2430,225",
		rects="2366,215.5,2494,234.5",
		width=1.7778];
	reference -> filter_vcf	[_draw_="c 7 -#000000 B 31 1422.58 673.52 1428.94 670.24 1436.62 666.85 1444 665 1478.97 656.25 1570.12 660.47 1606 657 1745.01 643.54 1780.35 \
640.86 1917 612 1989.69 596.65 2011.1 599.33 2078 567 2088.82 561.77 2242.04 444.93 2253 440 2299.91 418.9 2317.09 430.93 2366 415 \
2413.5 399.53 2428.78 399.63 2469 370 2486.51 357.11 2486.05 348.78 2501 333 2524.35 308.36 2542.72 311.24 2556 280 2567.9 252.02 \
2536.54 238.52 2502.13 232.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2502.63 229.61 2495.31 230.83 2501.8 234.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2273 448.1 0 40 9 -reference ",
		label=reference,
		lp="2273,450",
		pos="e,2493.8,230.58 1422.6,673.52 1428.9,670.24 1436.6,666.85 1444,665 1479,656.25 1570.1,660.47 1606,657 1745,643.54 1780.4,640.86 \
1917,612 1989.7,596.65 2011.1,599.33 2078,567 2088.8,561.77 2242,444.93 2253,440 2299.9,418.9 2317.1,430.93 2366,415 2413.5,399.53 \
2428.8,399.63 2469,370 2486.5,357.11 2486,348.78 2501,333 2524.3,308.36 2542.7,311.24 2556,280 2567.9,252.02 2536.5,238.52 2502.1,\
232.01"];
	reference -> annotate_variants	[_draw_="c 7 -#000000 B 22 1422.58 673.52 1428.94 670.25 1436.63 666.85 1444 665 1461.27 660.67 1588.82 666.29 1604 657 1647.31 630.5 1621.31 \
589.67 1661 558 1670.45 550.46 1677.23 557.12 1687 550 1695.77 543.61 1693.85 538.16 1701 530 1720.48 507.76 1723.52 498.15 1750 \
485 1778.77 470.71 1812.68 462.37 1843.72 457.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1843.9 459.97 1850.47 456.52 1843.19 455.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1681 560.6 0 40 9 -reference ",
		label=reference,
		lp="1681,562.5",
		pos="e,1852,456.3 1422.6,673.52 1428.9,670.25 1436.6,666.85 1444,665 1461.3,660.67 1588.8,666.29 1604,657 1647.3,630.5 1621.3,589.67 \
1661,558 1670.5,550.46 1677.2,557.12 1687,550 1695.8,543.61 1693.9,538.16 1701,530 1720.5,507.76 1723.5,498.15 1750,485 1778.8,470.71 \
1812.7,462.37 1843.7,457.52"];
	combine	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1108.5 575.5 1108.5 594.5 1263.5 594.5 1263.5 575.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1186 582.5 0 139 26 -CombineVariants (GATK 3.6) ",
		height=0.27778,
		label="CombineVariants (GATK 3.6)",
		pos="1186,585",
		rects="1108.5,575.5,1263.5,594.5",
		width=2.1528];
	reference -> combine	[_draw_="c 7 -#000000 B 13 1422.58 673.56 1428.95 670.29 1436.63 666.88 1444 665 1458.56 661.28 1568.69 667.93 1579 657 1581.74 654.09 1581.6 \
651.04 1579 648 1573.74 641.84 1365.24 611.43 1254.13 595.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1254.75 593.22 1247.47 594.66 1254.06 598.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1563 628.1 0 40 9 -reference ",
		label=reference,
		lp="1563,630",
		pos="e,1246,594.45 1422.6,673.56 1429,670.29 1436.6,666.88 1444,665 1458.6,661.28 1568.7,667.93 1579,657 1581.7,654.09 1581.6,651.04 \
1579,648 1573.7,641.84 1365.2,611.43 1254.1,595.61"];
	pindel	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1053 620.5 1053 639.5 1187 639.5 1187 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1120 627.5 0 118 24 -pindel parallel workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="pindel parallel workflow",
		pos="1120,630",
		rects="1053,620.5,1187,639.5",
		width=1.8611];
	reference -> pindel	[_draw_="c 7 -#000000 B 16 1425.07 673.54 1431.01 670.71 1437.75 667.61 1444 665 1453.6 661 1460.03 665.52 1466 657 1468.29 653.72 1468.78 \
650.88 1466 648 1457.59 639.27 1260.1 640.65 1248 640 1230.89 639.08 1212.51 637.91 1195.16 636.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1195.4 634.27 1188.25 636.22 1195.06 639.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1487 650.6 0 40 9 -reference ",
		label=reference,
		lp="1487,652.5",
		pos="e,1186.7,636.12 1425.1,673.54 1431,670.71 1437.7,667.61 1444,665 1453.6,661 1460,665.52 1466,657 1468.3,653.72 1468.8,650.88 1466,\
648 1457.6,639.27 1260.1,640.65 1248,640 1230.9,639.08 1212.5,637.91 1195.2,636.71"];
	reference -> normal_bam_readcount	[_draw_="c 7 -#000000 B 16 1422.58 673.55 1428.95 670.28 1436.63 666.87 1444 665 1459.1 661.16 1573.3 668.33 1584 657 1634.41 603.63 1494 \
591.91 1494 518.5 1494 518.5 1494 518.5 1494 449 1494 429.28 1541.72 418.17 1583.86 412.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1584.09 414.65 1590.7 411.29 1583.43 409.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1535.5 538.1 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="1535.5,540",
		pos="e,1592.2,411.09 1422.6,673.55 1428.9,670.28 1436.6,666.87 1444,665 1459.1,661.16 1573.3,668.33 1584,657 1634.4,603.63 1494,591.91 \
1494,518.5 1494,518.5 1494,518.5 1494,449 1494,429.28 1541.7,418.17 1583.9,412.21"];
	strelka	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1249.5 620.5 1249.5 639.5 1346.5 639.5 1346.5 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1298 627.5 0 81 16 -strelka workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="strelka workflow",
		pos="1298,630",
		rects="1249.5,620.5,1346.5,639.5",
		width=1.3472];
	reference -> strelka	[_draw_="c 7 -#000000 B 10 1422.61 673.66 1428.98 670.41 1436.66 666.99 1444 665 1482.86 654.44 1560.43 677.49 1533 648 1521.09 635.2 1420.31 \
631.91 1354.65 631.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1354.97 628.7 1347.94 631.07 1354.91 633.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1558 650.6 0 40 9 -reference ",
		label=reference,
		lp="1558,652.5",
		pos="e,1346.4,631.06 1422.6,673.66 1429,670.41 1436.7,666.99 1444,665 1482.9,654.44 1560.4,677.49 1533,648 1521.1,635.2 1420.3,631.91 \
1354.6,631.14"];
	mutect	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 796 620.5 796 639.5 934 639.5 934 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 865 627.5 0 122 24 -mutect parallel workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="mutect parallel workflow",
		pos="865,630",
		rects="796,620.5,934,639.5",
		width=1.9167];
	reference -> mutect	[_draw_="c 7 -#000000 B 13 1393.86 673.5 1387.68 670.22 1380.2 666.83 1373 665 1334.4 655.21 1231.94 669.07 1194 657 1186.95 654.76 1187.04 \
650.28 1180 648 1174.39 646.19 1033.53 639.11 942.09 634.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 942.3 632.23 935.19 634.34 942.06 637.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1214 650.6 0 40 9 -reference ",
		label=reference,
		lp="1214,652.5",
		pos="e,933.68,634.27 1393.9,673.5 1387.7,670.22 1380.2,666.83 1373,665 1334.4,655.21 1231.9,669.07 1194,657 1187,654.76 1187,650.28 1180,\
648 1174.4,646.19 1033.5,639.11 942.09,634.68"];
	reference -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 22 1422.57 673.51 1428.94 670.24 1436.62 666.84 1444 665 1500.75 650.86 1705 689.49 1705 631 1705 631 1705 631 1705 \
561.5 1705 547.44 1698.47 540.34 1708 530 1768.12 464.78 2044.04 528 2101 460 2111.8 447.1 2105.27 434.51 2093 423 2091.24 421.35 \
2089.31 419.86 2087.26 418.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2088.58 416.43 2081.28 415.15 2086.19 420.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1740.5 538.1 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="1740.5,540",
		pos="e,2080,414.41 1422.6,673.51 1428.9,670.24 1436.6,666.84 1444,665 1500.8,650.86 1705,689.49 1705,631 1705,631 1705,631 1705,561.5 \
1705,547.44 1698.5,540.34 1708,530 1768.1,464.78 2044,528 2101,460 2111.8,447.1 2105.3,434.51 2093,423 2091.2,421.35 2089.3,419.86 \
2087.3,418.5"];
	tumor_bam -> varscan	[_draw_="c 7 -#000000 B 13 1070.11 673.62 1062.95 670.27 1054.26 666.8 1046 665 980.4 650.73 808.94 674.04 744 657 735.73 654.83 735.23 650.31 \
727 648 687.07 636.79 576.33 632.97 506.67 631.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 506.95 629.22 499.9 631.55 506.86 634.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 767 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="767,652.5",
		pos="e,498.39,631.52 1070.1,673.62 1062.9,670.27 1054.3,666.8 1046,665 980.4,650.73 808.94,674.04 744,657 735.73,654.83 735.23,650.31 \
727,648 687.07,636.79 576.33,632.97 506.67,631.67"];
	tumor_bam -> filter_vcf	[_draw_="c 7 -#000000 B 31 1102.31 673.61 1109.65 670.26 1118.56 666.78 1127 665 1163.86 657.21 1431.92 673.07 1466 657 1485.66 647.73 1483.52 \
636.22 1498 620 1526.26 588.36 1596.22 506.14 1633 485 1662.73 467.91 1678.77 480.84 1706 460 1721.76 447.94 1714.5 434.03 1731 \
423 1828.68 357.71 1897.45 442.39 1990 370 2015.21 350.28 1998.53 327.79 2021 305 2052.68 272.87 2068.72 272.76 2112 260 2194.1 \
235.79 2292.63 228.41 2358.04 226.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2357.8 228.82 2364.73 226.18 2357.66 223.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1741 448.1 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1741,450",
		pos="e,2366.2,226.13 1102.3,673.61 1109.7,670.26 1118.6,666.78 1127,665 1163.9,657.21 1431.9,673.07 1466,657 1485.7,647.73 1483.5,636.22 \
1498,620 1526.3,588.36 1596.2,506.14 1633,485 1662.7,467.91 1678.8,480.84 1706,460 1721.8,447.94 1714.5,434.03 1731,423 1828.7,357.71 \
1897.5,442.39 1990,370 2015.2,350.28 1998.5,327.79 2021,305 2052.7,272.87 2068.7,272.76 2112,260 2194.1,235.79 2292.6,228.41 2358,\
226.37"];
	tumor_bam -> pindel	[_draw_="c 7 -#000000 B 13 1102.75 673.63 1110.02 670.38 1118.75 666.96 1127 665 1138.71 662.22 1226.81 665.82 1235 657 1237.72 654.07 1237.61 \
651.03 1235 648 1229.11 641.18 1213.33 637.04 1195.28 634.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1195.6 632.13 1188.36 633.71 1195.01 636.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1260 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1260,652.5",
		pos="e,1186.9,633.53 1102.7,673.63 1110,670.38 1118.8,666.96 1127,665 1138.7,662.22 1226.8,665.82 1235,657 1237.7,654.07 1237.6,651.03 \
1235,648 1229.1,641.18 1213.3,637.04 1195.3,634.56"];
	tumor_bam -> strelka	[_draw_="c 7 -#000000 B 10 1102.73 673.54 1110 670.27 1118.73 666.87 1127 665 1144.04 661.15 1269.24 666.34 1284 657 1287.7 654.66 1290.5 \
650.98 1292.57 647.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1294.82 648.1 1295.3 640.7 1290.31 646.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1314 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1314,652.5",
		pos="e,1295.9,639.31 1102.7,673.54 1110,670.27 1118.7,666.87 1127,665 1144,661.15 1269.2,666.34 1284,657 1287.7,654.66 1290.5,650.98 \
1292.6,647.12"];
	tumor_bam -> mutect	[_draw_="c 7 -#000000 B 7 1086.58 673.61 1086.61 665.73 1085.27 654.24 1078 648 1067.64 639.1 998.72 634.82 942.04 632.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 942.37 630.34 935.29 632.55 942.2 635.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1106 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1106,652.5",
		pos="e,933.77,632.5 1086.6,673.61 1086.6,665.73 1085.3,654.24 1078,648 1067.6,639.1 998.72,634.82 942.04,632.78"];
	tumor_bam -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 25 1102.3 673.59 1109.65 670.23 1118.55 666.76 1127 665 1225.35 644.51 1480.08 674.54 1579 657 1639.2 646.33 1657.31 \
644.65 1709 612 1741.68 591.36 1747.52 581.45 1770 550 1775.78 541.91 1772.02 535.93 1780 530 1839.66 485.69 2076.67 527.84 2107 \
460 2113.8 444.79 2112.88 434.68 2101 423 2099.31 421.34 2097.46 419.85 2095.5 418.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2097.04 416.56 2089.75 415.2 2094.6 420.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1789.5 538.1 0 19 3 -bam ",
		label=bam,
		lp="1789.5,540",
		pos="e,2088.4,414.45 1102.3,673.59 1109.6,670.23 1118.6,666.76 1127,665 1225.3,644.51 1480.1,674.54 1579,657 1639.2,646.33 1657.3,644.65 \
1709,612 1741.7,591.36 1747.5,581.45 1770,550 1775.8,541.91 1772,535.93 1780,530 1839.7,485.69 2076.7,527.84 2107,460 2113.8,444.79 \
2112.9,434.68 2101,423 2099.3,421.34 2097.5,419.85 2095.5,418.5"];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 3489.77 673.51 3431.48 661.22 3332 639.07 3332 631 3332 631 3332 631 3332 134 3332 100.23 2846.74 87.85 2652.75 \
84.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2652.85 81.8 2645.8 84.12 2652.76 86.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3365 380.6 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="3365,382.5",
		pos="e,2644.3,84.096 3489.8,673.51 3431.5,661.22 3332,639.07 3332,631 3332,631 3332,631 3332,134 3332,100.23 2846.7,87.85 2652.7,84.251"];
	interval_list -> varscan	[_draw_="c 7 -#000000 B 10 801.69 673.61 794.35 670.26 785.44 666.79 777 665 759 661.19 458.85 670.16 446 657 443.58 654.53 442.7 651.21 \
442.65 647.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 445.07 648.16 443.64 640.89 440.22 647.47 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 469.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="469.5,652.5",
		pos="e,443.85,639.39 801.69,673.61 794.35,670.26 785.44,666.79 777,665 759,661.19 458.85,670.16 446,657 443.58,654.53 442.7,651.21 442.65,\
647.77"];
	interval_list -> pindel	[_draw_="c 7 -#000000 B 13 801.24 673.68 793.96 670.43 785.24 667.01 777 665 735.75 654.95 653.46 678.49 683 648 692.79 637.9 921.95 640.57 \
936 640 971.79 638.56 1011.49 636.66 1044.82 634.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1044.77 637.43 1051.64 634.62 1044.52 632.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 706.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="706.5,652.5",
		pos="e,1053.2,634.55 801.24,673.68 793.96,670.43 785.24,667.01 777,665 735.75,654.95 653.46,678.49 683,648 692.79,637.9 921.95,640.57 \
936,640 971.79,638.56 1011.5,636.66 1044.8,634.97"];
	interval_list -> strelka	[_draw_="c 7 -#000000 B 10 805.53 673.61 796.22 666.36 786.31 655.84 794 648 801.68 640.16 1178.04 640.56 1189 640 1206.11 639.12 1224.7 \
637.74 1241.6 636.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1241.48 638.8 1248.24 635.76 1241.06 633.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 817.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="817.5,652.5",
		pos="e,1249.8,635.63 805.53,673.61 796.22,666.36 786.31,655.84 794,648 801.68,640.16 1178,640.56 1189,640 1206.1,639.12 1224.7,637.74 \
1241.6,636.33"];
	interval_list -> mutect	[_draw_="c 7 -#000000 B 13 801.27 673.55 794 670.28 785.27 666.88 777 665 760.72 661.31 638.48 669.11 627 657 624.25 654.1 624.27 650.93 \
627 648 637.91 636.28 722.48 632.52 787.74 631.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 787.53 633.83 794.49 631.26 787.45 628.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 650.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="650.5,652.5",
		pos="e,796,631.24 801.27,673.55 794,670.28 785.27,666.88 777,665 760.72,661.31 638.48,669.11 627,657 624.25,654.1 624.27,650.93 627,648 \
637.91,636.28 722.48,632.52 787.74,631.37"];
	normal_bam -> varscan	[_draw_="c 7 -#000000 B 13 880.85 673.61 873.14 670.26 863.81 666.78 855 665 779.62 649.74 583.84 674.74 509 657 499.91 654.84 498.57 651.72 \
490 648 485.77 646.16 481.26 644.29 476.83 642.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 477.81 640.25 470.4 639.93 475.99 644.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 534.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="534.5,652.5",
		pos="e,468.99,639.37 880.85,673.61 873.14,670.26 863.81,666.78 855,665 779.62,649.74 583.84,674.74 509,657 499.91,654.84 498.57,651.72 \
490,648 485.77,646.16 481.26,644.29 476.83,642.5"];
	normal_bam -> pindel	[_draw_="c 7 -#000000 B 10 919.88 673.55 934.09 667.93 951.19 660.89 958 657 963.79 653.69 963.8 650.46 970 648 983.75 642.54 1014.54 638.59 \
1044.67 635.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1044.86 638.32 1051.63 635.28 1044.44 633.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 995.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="995.5,652.5",
		pos="e,1053.1,635.15 919.88,673.55 934.09,667.93 951.19,660.89 958,657 963.79,653.69 963.8,650.46 970,648 983.75,642.54 1014.5,638.59 \
1044.7,635.88"];
	normal_bam -> normal_bam_readcount	[_draw_="c 7 -#000000 B 10 915.9 673.71 924.49 669.33 934.7 663.51 943 657 982.1 626.33 976.96 601.49 1019 575 1202.76 459.19 1464.99 422 \
1583.97 410.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1584.04 413.12 1590.78 410.03 1583.59 408.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1108.5 538.1 0 19 3 -bam ",
		label=bam,
		lp="1108.5,540",
		pos="e,1592.3,409.89 915.9,673.71 924.49,669.33 934.7,663.51 943,657 982.1,626.33 976.96,601.49 1019,575 1202.8,459.19 1465,422 1584,\
410.67"];
	normal_bam -> strelka	[_draw_="c 7 -#000000 B 16 916.05 673.59 923.61 670.41 932.58 667.06 941 665 974.42 656.82 987.38 672.7 1018 657 1022.76 654.56 1021.17 650.31 \
1026 648 1042.35 640.17 1170.91 641.19 1189 640 1206.1 638.87 1224.68 637.42 1241.59 636.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1241.46 638.49 1248.23 635.46 1241.04 633.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1051.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="1051.5,652.5",
		pos="e,1249.7,635.33 916.05,673.59 923.61,670.41 932.58,667.06 941,665 974.42,656.82 987.38,672.7 1018,657 1022.8,654.56 1021.2,650.31 \
1026,648 1042.4,640.17 1170.9,641.19 1189,640 1206.1,638.87 1224.7,637.42 1241.6,636.02"];
	normal_bam -> mutect	[_draw_="c 7 -#000000 B 7 896.71 673.54 895.29 666.25 892.42 655.71 887 648 886.2 646.86 885.3 645.76 884.33 644.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 886.24 643.13 879.41 640.24 882.94 646.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 916.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="916.5,652.5",
		pos="e,878.29,639.22 896.71,673.54 895.29,666.25 892.42,655.71 887,648 886.2,646.86 885.3,645.76 884.33,644.71"];
	strelka_exome_mode -> strelka	[_draw_="c 7 -#000000 B 10 1214.93 673.58 1226.33 670.44 1239.7 667.12 1252 665 1262.22 663.24 1337.99 664.64 1345 657 1350.15 651.38 1347.22 \
646.7 1340.85 642.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1342.24 640.88 1334.86 640.11 1340.15 645.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1374.5 650.6 0 55 10 -exome_mode ",
		label=exome_mode,
		lp="1374.5,652.5",
		pos="e,1333.5,639.47 1214.9,673.58 1226.3,670.44 1239.7,667.12 1252,665 1262.2,663.24 1338,664.64 1345,657 1350.2,651.38 1347.2,646.7 \
1340.8,642.93"];
	varscan_min_coverage -> varscan	[_draw_="c 7 -#000000 B 13 426.72 673.52 415.01 670.48 401.45 667.25 389 665 373.37 662.18 328.58 668.84 318 657 315.33 654.02 315.36 651.01 \
318 648 327.29 637.4 358.17 633.1 387.38 631.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 387.17 633.93 394.05 631.15 386.94 629.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 347 650.6 0 58 12 -min_coverage ",
		label=min_coverage,
		lp="347,652.5",
		pos="e,395.56,631.08 426.72,673.52 415.01,670.48 401.45,667.25 389,665 373.37,662.18 328.58,668.84 318,657 315.33,654.02 315.36,651.01 \
318,648 327.29,637.4 358.17,633.1 387.38,631.47"];
	varscan_min_var_freq -> varscan	[_draw_="c 7 -#000000 B 10 559.99 673.5 548.34 670.31 534.63 666.98 522 665 506.94 662.64 395.46 668.09 385 657 379.23 650.89 381.61 646.16 \
388.02 642.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 388.77 644.86 394.22 639.82 386.82 640.36 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 411 650.6 0 52 12 -min_var_freq ",
		label=min_var_freq,
		lp="411,652.5",
		pos="e,395.61,639.22 559.99,673.5 548.34,670.31 534.63,666.98 522,665 506.94,662.64 395.46,668.09 385,657 379.23,650.89 381.61,646.16 \
388.02,642.51"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2345.5 0.5 2345.5 19.5 2502.5 19.5 2502.5 0.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2424 7.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="2424,10",
		rects="2345.5,0.5,2502.5,19.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 31 1526.62 673.5 1536.75 670.57 1548.33 667.41 1559 665 1569.33 662.66 1599.17 665.1 1606 657 1643 613.17 1559.83 \
582.48 1583 530 1599.52 492.59 1614.34 486.14 1651 468 1668.81 459.18 1680.97 474.08 1695 460 1729.96 424.9 1683.72 389.96 1713 \
350 1781.27 256.86 1847.39 295.1 1946 235 1987.52 209.7 1989.41 189.4 2034 170 2189.47 102.36 2290.17 220.94 2409 100 2418.8 90.03 \
2422.22 50.73 2423.4 27.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2425.84 28.02 2423.7 20.92 2420.95 27.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1734 358.1 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="1734,360",
		pos="e,2423.8,19.406 1526.6,673.5 1536.7,670.57 1548.3,667.41 1559,665 1569.3,662.66 1599.2,665.1 1606,657 1643,613.17 1559.8,582.48 \
1583,530 1599.5,492.59 1614.3,486.14 1651,468 1668.8,459.18 1681,474.08 1695,460 1730,424.9 1683.7,389.96 1713,350 1781.3,256.86 \
1847.4,295.1 1946,235 1987.5,209.7 1989.4,189.4 2034,170 2189.5,102.36 2290.2,220.94 2409,100 2418.8,90.029 2422.2,50.726 2423.4,\
27.82"];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 13 3337.54 673.53 3325.33 670.42 3311.08 667.14 3298 665 3254.53 657.89 2903 675.05 2903 631 2903 631 2903 631 2903 \
134 2903 108.76 2749.86 94.22 2652.54 87.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2652.83 85.1 2645.69 87.07 2652.5 89.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2914.5 380.6 0 23 6 -fields ",
		label=fields,
		lp="2914.5,382.5",
		pos="e,2644.2,86.965 3337.5,673.53 3325.3,670.42 3311.1,667.14 3298,665 3254.5,657.89 2903,675.05 2903,631 2903,631 2903,631 2903,134 \
2903,108.76 2749.9,94.222 2652.5,87.53"];
	vep_ensembl_assembly -> annotate_variants	[_draw_="c 7 -#000000 B 22 2384.1 673.51 2371.72 670.4 2357.27 667.12 2344 665 2322.42 661.56 2265.55 666.76 2246 657 2195.38 631.74 2128.44 \
600.31 2166 558 2185.91 535.57 2213.09 572.43 2233 550 2238.9 543.35 2238.01 537.34 2233 530 2211.75 498.84 2111.56 477.28 2075 \
468 2065.45 465.57 2047.89 462.95 2028.46 460.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2028.78 458.08 2021.54 459.66 2028.19 462.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2205.5 560.6 0 79 16 -ensembl_assembly ",
		label=ensembl_assembly,
		lp="2205.5,562.5",
		pos="e,2020,459.48 2384.1,673.51 2371.7,670.4 2357.3,667.12 2344,665 2322.4,661.56 2265.6,666.76 2246,657 2195.4,631.74 2128.4,600.31 \
2166,558 2185.9,535.57 2213.1,572.43 2233,550 2238.9,543.35 2238,537.34 2233,530 2211.8,498.84 2111.6,477.28 2075,468 2065.4,465.57 \
2047.9,462.95 2028.5,460.51"];
	readcount_minimum_base_quality -> normal_bam_readcount	[_draw_="c 7 -#000000 B 22 2667.02 673.55 2649.85 670.28 2629.52 666.88 2611 665 2478.74 651.6 2443.81 674.3 2312 657 2290.65 654.2 1952.47 \
579.59 1935 567 1919.29 555.68 1927.29 541.88 1912 530 1839.85 473.95 1805.58 485.97 1716 468 1706.27 466.05 1633.7 467.33 1627 \
460 1616.96 449.02 1625.35 432.56 1634.14 420.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1635.83 422.51 1638.27 415.51 1631.99 419.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1958.5 538.1 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="1958.5,540",
		pos="e,1639.2,414.33 2667,673.55 2649.9,670.28 2629.5,666.88 2611,665 2478.7,651.6 2443.8,674.3 2312,657 2290.7,654.2 1952.5,579.59 1935,\
567 1919.3,555.68 1927.3,541.88 1912,530 1839.8,473.95 1805.6,485.97 1716,468 1706.3,466.05 1633.7,467.33 1627,460 1617,449.02 1625.4,\
432.56 1634.1,420.7"];
	readcount_minimum_base_quality -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 16 2666.54 673.53 2649.47 670.3 2629.35 666.93 2611 665 2560.14 659.64 2431.26 666.47 2381 657 2346.74 650.54 2307 \
665.86 2307 631 2307 631 2307 631 2307 449 2307 429.39 2189.05 416.61 2112.96 410.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2113.5 408 2106.33 409.88 2113.11 412.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2342.5 538.1 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="2342.5,540",
		pos="e,2104.8,409.76 2666.5,673.53 2649.5,670.3 2629.3,666.93 2611,665 2560.1,659.64 2431.3,666.47 2381,657 2346.7,650.54 2307,665.86 \
2307,631 2307,631 2307,631 2307,449 2307,429.39 2189,416.61 2113,410.41"];
	varscan_strand_filter -> varscan	[_draw_="c 7 -#000000 B 7 90.98 673.56 106.29 665.4 131.01 653.49 154 648 196.77 637.78 315.05 633.61 387.59 631.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 387.3 634.44 394.25 631.84 387.2 629.54 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 178.5 650.6 0 49 13 -strand_filter ",
		label=strand_filter,
		lp="178.5,652.5",
		pos="e,395.76,631.81 90.981,673.56 106.29,665.4 131.01,653.49 154,648 196.77,637.78 315.05,633.61 387.59,631.98"];
	filter_mapq0_threshold -> filter_vcf	[_draw_="c 7 -#000000 B 31 2840.15 673.54 2827.95 670.22 2813.39 666.79 2800 665 2757.7 659.34 2455.95 672.01 2416 657 2399.17 650.68 2385 \
648.98 2385 631 2385 631 2385 631 2385 561.5 2385 547.16 2384.25 542.91 2378 530 2357.36 487.39 2296.99 480.81 2321 440 2332.6 420.28 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2368 448.1 0 94 22 -filter_mapq0_threshold ",
		label=filter_mapq0_threshold,
		lp="2368,450",
		pos="e,2417.4,234.28 2840.2,673.54 2828,670.22 2813.4,666.79 2800,665 2757.7,659.34 2455.9,672.01 2416,657 2399.2,650.68 2385,648.98 \
2385,631 2385,631 2385,631 2385,561.5 2385,547.16 2384.3,542.91 2378,530 2357.4,487.39 2297,480.81 2321,440 2332.6,420.28 2349.9,\
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	vep_cache_dir -> annotate_variants	[_draw_="c 7 -#000000 B 13 1686.31 673.65 1694.49 670.55 1704.08 667.25 1713 665 1736.53 659.07 1747.87 671.93 1767 657 1815.36 619.27 1781.22 \
576.68 1821 530 1846.5 500.08 1885.98 476.64 1911.91 463.3 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1824 560.6 0 40 9 -cache_dir ",
		label=cache_dir,
		lp="1824,562.5",
		pos="e,1919.5,459.49 1686.3,673.65 1694.5,670.55 1704.1,667.25 1713,665 1736.5,659.07 1747.9,671.93 1767,657 1815.4,619.27 1781.2,576.68 \
1821,530 1846.5,500.08 1886,476.64 1911.9,463.3"];
	varscan_max_normal_freq -> varscan	[_draw_="c 7 -#000000 B 7 208.4 673.61 204.9 665.95 201.66 654.81 208 648 219.98 635.14 320.32 631.85 387.13 631.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 387.02 633.55 393.99 631.03 386.97 628.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 243 650.6 0 70 15 -max_normal_freq ",
		label=max_normal_freq,
		lp="243,652.5",
		pos="e,395.51,631.02 208.4,673.61 204.9,665.95 201.66,654.81 208,648 219.98,635.14 320.32,631.85 387.13,631.1"];
	vep_ensembl_species -> annotate_variants	[_draw_="c 7 -#000000 B 13 1781.02 673.68 1784.52 668.82 1789.02 662.57 1793 657 1824.3 613.13 1815.94 584.25 1863 558 1875.44 551.06 1981.24 \
560.39 1991 550 2015.28 524.15 1978.3 485.06 1954.85 464.59 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1898.5 560.6 0 71 15 -ensembl_species ",
		label=ensembl_species,
		lp="1898.5,562.5",
		pos="e,1948.7,459.33 1781,673.68 1784.5,668.82 1789,662.57 1793,657 1824.3,613.13 1815.9,584.25 1863,558 1875.4,551.06 1981.2,560.39 \
1991,550 2015.3,524.15 1978.3,485.06 1954.9,464.59"];
	cle_vcf_filter -> filter_vcf	[_draw_="c 7 -#000000 B 16 2958.86 673.59 2951.15 670.24 2941.82 666.76 2933 665 2836.23 645.66 2585.92 675.56 2489 657 2456.81 650.84 2420 \
663.77 2420 631 2420 631 2420 631 2420 269 2420 260.09 2422.06 250.41 2424.31 242.49 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2452.5 448.1 0 65 17 -do_cle_vcf_filter ",
		label=do_cle_vcf_filter,
		lp="2452.5,450",
		pos="e,2426.8,234.43 2958.9,673.59 2951.1,670.24 2941.8,666.76 2933,665 2836.2,645.66 2585.9,675.56 2489,657 2456.8,650.84 2420,663.77 \
2420,631 2420,631 2420,631 2420,269 2420,260.09 2422.1,250.41 2424.3,242.49"];
	mutect_scatter_count -> mutect	[_draw_="c 7 -#000000 B 10 687.74 673.55 676.41 670.44 663.17 667.16 651 665 613.49 658.35 540.84 675.69 567 648 581.88 632.25 704.52 629.82 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 595 650.6 0 56 13 -scatter_count ",
		label=scatter_count,
		lp="595,652.5",
		pos="e,796.19,630.06 687.74,673.55 676.41,670.44 663.17,667.16 651,665 613.49,658.35 540.84,675.69 567,648 581.88,632.25 704.52,629.82 \
787.76,630.03"];
	varscan_p_value -> varscan	[_draw_="c 7 -#000000 B 7 304.85 673.51 287.92 667.71 273.02 659.07 283 648 290.07 640.16 343.43 635.71 387.4 633.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 387.39 635.8 394.25 633 387.14 630.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 299 650.6 0 32 7 -p_value ",
		label=p_value,
		lp="299,652.5",
		pos="e,395.77,632.92 304.85,673.51 287.92,667.71 273.02,659.07 283,648 290.07,640.16 343.43,635.71 387.4,633.35"];
	synonyms_file -> annotate_variants	[_draw_="c 7 -#000000 B 13 2013.84 673.74 2015.91 663.7 2019 646.19 2019 631 2019 631 2019 631 2019 494 2019 481.27 2016.82 476.1 2007 468 \
2004.86 466.23 2002.56 464.65 2000.15 463.22 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2048 560.6 0 58 13 -synonyms_file ",
		label=synonyms_file,
		lp="2048,562.5",
		pos="e,1992.6,459.41 2013.8,673.74 2015.9,663.7 2019,646.19 2019,631 2019,631 2019,631 2019,494 2019,481.27 2016.8,476.1 2007,468 2004.9,\
466.23 2002.6,464.65 2000.2,463.22"];
	vep_plugins -> annotate_variants	[_draw_="c 7 -#000000 B 10 2097 673.7 2097 663.6 2097 646.05 2097 631 2097 631 2097 631 2097 494 2097 477.58 2065.02 467.24 2029.74 460.83 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2112.5 560.6 0 31 7 -plugins ",
		label=plugins,
		lp="2112.5,562.5",
		pos="e,2021.7,459.44 2097,673.7 2097,663.6 2097,646.05 2097,631 2097,631 2097,631 2097,494 2097,477.58 2065,467.24 2029.7,460.83"];
	filter_minimum_depth -> filter_vcf	[_draw_="c 7 -#000000 B 19 3054.99 673.52 3043.15 670.2 3029.01 666.77 3016 665 2921.08 652.08 2679.76 671.03 2585 657 2542.97 650.78 2493 \
673.49 2493 631 2493 631 2493 631 2493 471.5 2493 382.95 2457.01 366.49 2438 280 2435.29 267.69 2433.24 253.59 2431.89 242.89 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2536 448.1 0 88 20 -filter_minimum_depth ",
		label=filter_minimum_depth,
		lp="2536,450",
		pos="e,2430.9,234.48 3055,673.52 3043.2,670.2 3029,666.77 3016,665 2921.1,652.08 2679.8,671.03 2585,657 2543,650.78 2493,673.49 2493,\
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	strelka_cpu_reserved -> strelka	[_draw_="c 7 -#000000 B 13 1343.21 673.56 1353.63 670.79 1365.3 667.72 1376 665 1390.63 661.28 1399.67 668.86 1409 657 1411.47 653.86 1411.61 \
651.03 1409 648 1401.62 639.4 1378.04 635.1 1354.5 632.98 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1437.5 650.6 0 55 12 -cpu_reserved ",
		label=cpu_reserved,
		lp="1437.5,652.5",
		pos="e,1346.2,632.31 1343.2,673.56 1353.6,670.79 1365.3,667.72 1376,665 1390.6,661.28 1399.7,668.86 1409,657 1411.5,653.86 1411.6,651.03 \
1409,648 1401.6,639.4 1378,635.1 1354.5,632.98"];
	filter_somatic_llr_threshold -> filter_vcf	[_draw_="c 7 -#000000 B 25 3190.59 673.55 3176.66 670.28 3160.13 666.88 3145 665 3114.29 661.19 2589 661.95 2589 631 2589 631 2589 631 2589 \
471.5 2589 457.06 2589.04 452 2581 440 2557.58 405.03 2505 425.59 2505 383.5 2505 383.5 2505 383.5 2505 314 2505 284.5 2466.49 302.99 \
2448 280 2445.54 276.94 2439.2 256.89 2434.75 242.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2437.17 241.65 2432.82 235.64 2432.47 243.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2642.5 448.1 0 109 28 -filter_somatic_llr_threshold ",
		label=filter_somatic_llr_threshold,
		lp="2642.5,450",
		pos="e,2432.4,234.19 3190.6,673.55 3176.7,670.28 3160.1,666.88 3145,665 3114.3,661.19 2589,661.95 2589,631 2589,631 2589,631 2589,471.5 \
2589,457.06 2589,452 2581,440 2557.6,405.03 2505,425.59 2505,383.5 2505,383.5 2505,383.5 2505,314 2505,284.5 2466.5,302.99 2448,\
280 2445.5,276.94 2439.2,256.89 2434.7,242.11"];
	annotate_coding_only -> annotate_variants	[_draw_="c 7 -#000000 B 19 2520.32 673.51 2508.61 670.27 2494.76 666.91 2482 665 2430.47 657.3 2250 683.11 2250 631 2250 631 2250 631 2250 \
561.5 2250 513.26 2218.08 502.17 2173 485 2140.25 472.53 2130.59 473.66 2096 468 2083.29 465.92 2058.82 463.09 2032.87 460.34 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2274.5 560.6 0 49 11 -coding_only ",
		label=coding_only,
		lp="2274.5,562.5",
		pos="e,2024.4,459.46 2520.3,673.51 2508.6,670.27 2494.8,666.91 2482,665 2430.5,657.3 2250,683.11 2250,631 2250,631 2250,631 2250,561.5 \
2250,513.26 2218.1,502.17 2173,485 2140.2,472.53 2130.6,473.66 2096,468 2083.3,465.92 2058.8,463.09 2032.9,460.34"];
	vep_pick -> annotate_variants	[_draw_="c 7 -#000000 B 22 1602.73 673.6 1608.74 670.34 1616 666.93 1623 665 1646.2 658.61 1710.88 670.2 1731 657 1772.56 629.74 1748.49 \
593.76 1783 558 1787.98 552.84 1791.71 554.83 1797 550 1805.02 542.69 1804.56 538.73 1811 530 1826.05 509.62 1825.92 500.45 1846 \
485 1859.45 474.65 1876.36 467.21 1892.01 461.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1892.67 464.34 1898.61 459.9 1891.19 459.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1791.5 560.6 0 17 4 -pick ",
		label=pick,
		lp="1791.5,562.5",
		pos="e,1900.1,459.44 1602.7,673.6 1608.7,670.34 1616,666.93 1623,665 1646.2,658.61 1710.9,670.2 1731,657 1772.6,629.74 1748.5,593.76 \
1783,558 1788,552.84 1791.7,554.83 1797,550 1805,542.69 1804.6,538.73 1811,530 1826,509.62 1825.9,500.45 1846,485 1859.4,474.65 \
1876.4,467.21 1892,461.98"];
	pindel_insert_size -> pindel	[_draw_="c 7 -#000000 B 10 1016.99 673.57 1026.8 670.42 1038.33 667.1 1049 665 1067.4 661.37 1120.39 670.87 1133 657 1135.81 653.91 1135.44 \
650.09 1133.66 646.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1135.76 645.08 1129.79 640.69 1131.72 647.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1157 650.6 0 44 11 -insert_size ",
		label=insert_size,
		lp="1157,652.5",
		pos="e,1128.9,639.44 1017,673.57 1026.8,670.42 1038.3,667.1 1049,665 1067.4,661.37 1120.4,670.87 1133,657 1135.8,653.91 1135.4,650.09 \
1133.7,646.34"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2114 260.5 2114 279.5 2176 279.5 2176 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2145 267.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="2145,270",
		rects="2114,260.5,2176,279.5",
		width=0.86111];
	index -> final_vcf	[_draw_="c 7 -#000000 B 13 2114.05 269.08 2082.45 267.35 2038 259.03 2038 226 2038 226 2038 226 2038 134 2038 71.7 2115.7 121.97 2174 100 \
2177.63 98.63 2181.37 96.97 2184.97 95.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2186.08 97.42 2191.2 92.05 2183.85 93.05 ",
		pos="e,2192.5,91.363 2114.1,269.08 2082.4,267.35 2038,259.03 2038,226 2038,226 2038,226 2038,134 2038,71.695 2115.7,121.97 2174,100 2177.6,\
98.634 2181.4,96.972 2185,95.228"];
	index -> filter_vcf	[_draw_="c 7 -#000000 B 4 2175.77 264.36 2221 257.53 2306.47 244.64 2365.75 235.69 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2365.88 238.15 2372.44 234.69 2365.15 233.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2319.5 245.6 0 13 3 -vcf ",
		label=vcf,
		lp="2319.5,247.5",
		pos="e,2373.9,234.46 2175.8,264.36 2221,257.53 2306.5,244.64 2365.7,235.69"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 2555.91 72.56 2529.44 60.21 2480.04 37.15 2449.78 23.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2450.91 20.85 2443.53 20.11 2448.84 25.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2482.5 30.6 0 13 3 -tsv ",
		label=tsv,
		lp="2482.5,32.5",
		pos="e,2442.2,19.474 2555.9,72.556 2529.4,60.206 2480,37.152 2449.8,23.031"];
	varscan -> varscan_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 493.54 620.58 511.14 614.47 527 603.98 527 586 527 586 527 586 527 134 527 116.81 541.57 103.97 555.98 95.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 557.11 97.64 562.09 92.14 554.77 93.34 ",
		pos="e,563.42,91.419 493.54,620.58 511.14,614.47 527,603.98 527,586 527,586 527,586 527,134 527,116.81 541.57,103.97 555.98,95.468"];
	varscan -> varscan_filtered_vcf	[_draw_="c 7 -#000000 B 10 449.53 620.52 451.88 611.91 455 598.15 455 586 455 586 455 586 455 134 455 122.44 456.03 109.45 457.05 99.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 459.46 100.02 457.78 92.79 454.58 99.48 ",
		pos="e,457.95,91.288 449.53,620.52 451.88,611.91 455,598.15 455,586 455,586 455,586 455,134 455,122.44 456.03,109.45 457.05,99.476"];
	varscan -> combine	[_draw_="c 7 -#000000 B 4 498.38 626.01 623.63 618.72 945.74 599.98 1100.5 590.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1100.29 593.44 1107.13 590.59 1100 588.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 906.5 605.6 0 49 11 -varscan_vcf ",
		label=varscan_vcf,
		lp="906.5,607.5",
		pos="e,1108.6,590.5 498.38,626.01 623.63,618.72 945.74,599.98 1100.5,590.98"];
	annotated_filter_bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2397.5 170.5 2397.5 189.5 2462.5 189.5 2462.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2430 177.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="2430,180",
		rects="2397.5,170.5,2462.5,189.5",
		width=0.90278];
	filter_vcf -> annotated_filter_bgzip	[_draw_="c 7 -#000000 B 4 2430 215.71 2430 210.59 2430 203.85 2430 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2432.45 197.78 2430 190.78 2427.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2436.5 200.6 0 13 4 -file ",
		label=file,
		lp="2436.5,202.5",
		pos="e,2430,189.27 2430,215.71 2430,210.59 2430,203.85 2430,197.67"];
	add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2023 305.5 2023 324.5 2267 324.5 2267 305.5 ",
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		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="2145,315",
		rects="2023,305.5,2267,324.5",
		width=3.3889];
	add_normal_bam_readcount_to_vcf -> index	[_draw_="c 7 -#000000 B 4 2145 305.71 2145 300.59 2145 293.85 2145 287.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2147.45 287.78 2145 280.78 2142.55 287.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2151.5 290.6 0 13 3 -vcf ",
		label=vcf,
		lp="2151.5,292.5",
		pos="e,2145,279.27 2145,305.71 2145,300.59 2145,293.85 2145,287.67"];
	annotate_variants -> vep_summary	[_draw_="c 7 -#000000 B 10 1851.65 443.23 1805.87 437.7 1759 426.93 1759 406 1759 406 1759 406 1759 134 1759 121.68 1763.73 108.58 1768.34 \
98.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1770.43 100.05 1771.4 92.7 1766.06 97.84 ",
		pos="e,1772.1,91.344 1851.6,443.23 1805.9,437.7 1759,426.93 1759,406 1759,406 1759,406 1759,134 1759,121.68 1763.7,108.58 1768.3,98.75"];
	add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2014 350.5 2014 369.5 2258 369.5 2258 350.5 ",
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		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="2136,360",
		rects="2014,350.5,2258,369.5",
		width=3.3889];
	annotate_variants -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 2024.37 441.09 2119.61 432.21 2260.15 418.57 2265 415 2278.92 404.75 2288.47 390.94 2277 378 2274.53 375.21 2265.36 \
372.79 2252.8 370.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2253.35 368.33 2246.06 369.71 2252.62 373.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2287.5 403.1 0 13 3 -vcf ",
		label=vcf,
		lp="2287.5,405",
		pos="e,2244.6,369.48 2024.4,441.09 2119.6,432.21 2260.2,418.57 2265,415 2278.9,404.75 2288.5,390.94 2277,378 2274.5,375.21 2265.4,372.79 \
2252.8,370.72"];
	annotate_variants -> normal_bam_readcount	[_draw_="c 7 -#000000 B 7 1851.69 444.89 1817.37 442.38 1777.64 438.37 1742 432 1730.73 429.99 1705.26 422.97 1683.53 416.73 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1748.5 425.6 0 13 3 -vcf ",
		label=vcf,
		lp="1748.5,427.5",
		pos="e,1675.4,414.39 1851.7,444.89 1817.4,442.38 1777.6,438.37 1742,432 1730.7,429.99 1705.3,422.97 1683.5,416.73"];
	annotate_variants -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 4 1960.13 440.5 1977.31 433.91 2001.3 424.7 2020.18 417.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2020.85 419.82 2026.51 415.02 2019.09 415.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2010.5 425.6 0 13 3 -vcf ",
		label=vcf,
		lp="2010.5,427.5",
		pos="e,2027.9,414.48 1960.1,440.5 1977.3,433.91 2001.3,424.7 2020.2,417.45"];
	decompose	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1583 530.5 1583 549.5 1687 549.5 1687 530.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1635 537.5 0 88 16 -run vt decompose ",
		height=0.27778,
		label="run vt decompose",
		pos="1635,540",
		rects="1583,530.5,1687,549.5",
		width=1.4444];
	combine -> decompose	[_draw_="c 7 -#000000 B 7 1263.42 577.62 1339.1 571.22 1457.55 560.8 1560 550 1564.96 549.48 1570.11 548.91 1575.27 548.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1575.2 550.8 1581.88 547.57 1574.64 545.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1484.5 560.6 0 13 3 -vcf ",
		label=vcf,
		lp="1484.5,562.5",
		pos="e,1583.4,547.39 1263.4,577.62 1339.1,571.22 1457.6,560.8 1560,550 1565,549.48 1570.1,548.91 1575.3,548.32"];
	pindel -> pindel_filtered_vcf	[_draw_="c 7 -#000000 B 13 1053.42 621.21 1042.91 618.85 1034.14 615.84 1030 612 1021.22 603.87 1023 597.97 1023 586 1023 586 1023 586 1023 \
134 1023 114.67 1005.85 102.2 987.84 94.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 988.93 92.23 981.52 91.94 987.13 96.79 ",
		pos="e,980.11,91.381 1053.4,621.21 1042.9,618.85 1034.1,615.84 1030,612 1021.2,603.87 1023,597.97 1023,586 1023,586 1023,586 1023,134 \
1023,114.67 1005.8,102.2 987.84,94.429"];
	pindel -> pindel_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 1109.51 620.64 1100.86 612.73 1090 600.02 1090 586 1090 586 1090 586 1090 134 1090 120.85 1083.06 107.68 1076.35 \
98.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1078.44 96.72 1072.29 92.57 1074.51 99.65 ",
		pos="e,1071.4,91.361 1109.5,620.64 1100.9,612.73 1090,600.02 1090,586 1090,586 1090,586 1090,134 1090,120.85 1083.1,107.68 1076.3,98.01"];
	pindel -> combine	[_draw_="c 7 -#000000 B 4 1133.04 620.5 1142.44 614.38 1155.3 606 1166 599.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1167.19 601.18 1171.72 595.3 1164.52 597.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1179 605.6 0 42 10 -pindel_vcf ",
		label=pindel_vcf,
		lp="1179,607.5",
		pos="e,1173,594.48 1133,620.5 1142.4,614.38 1155.3,606 1166,599.03"];
	add_tumor_bam_readcount_to_vcf -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 4 2137.74 350.71 2138.83 345.47 2140.28 338.53 2141.6 332.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2143.92 333.1 2142.96 325.75 2139.13 332.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2147.5 335.6 0 13 3 -vcf ",
		label=vcf,
		lp="2147.5,337.5",
		pos="e,2143.3,324.27 2137.7,350.71 2138.8,345.47 2140.3,338.53 2141.6,332.24"];
	normal_bam_readcount -> normal_snv_bam_readcount_tsv	[_draw_="c 7 -#000000 B 10 1645.78 395.78 1644.6 387.14 1643 373.15 1643 361 1643 361 1643 361 1643 134 1643 122.59 1642.75 109.75 1642.5 \
99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1644.94 99.75 1642.3 92.82 1640.05 99.88 ",
		pos="e,1642.3,91.303 1645.8,395.78 1644.6,387.14 1643,373.15 1643,361 1643,361 1643,361 1643,134 1643,122.59 1642.7,109.75 1642.5,99.806"];
	normal_bam_readcount -> normal_indel_bam_readcount_tsv	[_draw_="c 7 -#000000 B 10 1592.12 400.2 1567.98 395.22 1545 384.35 1545 361 1545 361 1545 361 1545 134 1545 114.09 1527.74 101.78 1508.68 \
94.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1509.58 91.98 1502.17 91.93 1507.93 96.6 ",
		pos="e,1500.7,91.421 1592.1,400.2 1568,395.22 1545,384.35 1545,361 1545,361 1545,361 1545,134 1545,114.09 1527.7,101.78 1508.7,94.264"];
	normal_bam_readcount -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 13 1701.76 397.1 1724.18 394.16 1750.36 390.59 1774 387 1818.57 380.23 1831.15 384.01 1874 370 1892.89 363.82 1895.04 \
355.97 1914 350 1921.76 347.56 2010.73 334.79 2075.94 325.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2076.08 328.08 2082.67 324.68 2075.4 323.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1963 358.1 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="1963,360",
		pos="e,2084.2,324.47 1701.8,397.1 1724.2,394.16 1750.4,390.59 1774,387 1818.6,380.23 1831.2,384.01 1874,370 1892.9,363.82 1895,355.97 \
1914,350 1921.8,347.56 2010.7,334.79 2075.9,325.62"];
	normal_bam_readcount -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1692.7 395.55 1712.46 390.39 1735.1 382.33 1753 370 1762.37 363.54 1758.97 355.39 1769 350 1810.36 327.77 1923.2 \
319.78 2014.56 317.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2014.6 319.49 2021.53 316.84 2014.47 314.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1821 358.1 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="1821,360",
		pos="e,2023,316.8 1692.7,395.55 1712.5,390.39 1735.1,382.33 1753,370 1762.4,363.54 1759,355.39 1769,350 1810.4,327.77 1923.2,319.78 2014.6,\
317.04"];
	strelka -> strelka_filtered_vcf	[_draw_="c 7 -#000000 B 10 1301.48 620.6 1304.7 612.04 1309 598.33 1309 586 1309 586 1309 586 1309 134 1309 122.59 1309 109.75 1309 99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1311.45 99.82 1309 92.82 1306.55 99.82 ",
		pos="e,1309,91.304 1301.5,620.6 1304.7,612.04 1309,598.33 1309,586 1309,586 1309,586 1309,134 1309,122.59 1309,109.75 1309,99.808"];
	strelka -> strelka_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 1298 620.76 1298 612.1 1298 598.09 1298 586 1298 586 1298 586 1298 134 1298 118.32 1260.53 103.5 1229.53 93.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1230.27 91.58 1222.86 91.91 1228.86 96.27 ",
		pos="e,1221.4,91.474 1298,620.76 1298,612.1 1298,598.09 1298,586 1298,586 1298,586 1298,134 1298,118.32 1260.5,103.5 1229.5,93.914"];
	strelka -> combine	[_draw_="c 7 -#000000 B 7 1264.89 620.57 1256.36 618.09 1247.25 615.19 1239 612 1228.84 608.08 1217.98 602.93 1208.76 598.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1210.13 596.21 1202.79 595.17 1207.88 600.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1261 605.6 0 44 11 -strelka_vcf ",
		label=strelka_vcf,
		lp="1261,607.5",
		pos="e,1201.4,594.47 1264.9,620.57 1256.4,618.09 1247.3,615.19 1239,612 1228.8,608.08 1218,602.93 1208.8,598.26"];
	annotated_filter_index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2399 125.5 2399 144.5 2461 144.5 2461 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2430 132.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="2430,135",
		rects="2399,125.5,2461,144.5",
		width=0.86111];
	annotated_filter_index -> final_filtered_vcf	[_draw_="c 7 -#000000 B 4 2416.95 125.58 2404.49 117.53 2385.52 105.29 2371.12 95.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2372.55 93.99 2365.34 92.26 2369.89 98.11 ",
		pos="e,2364.1,91.434 2417,125.58 2404.5,117.53 2385.5,105.29 2371.1,95.989"];
	annotated_filter_index -> variants_to_table	[_draw_="c 7 -#000000 B 4 2453.78 125.58 2477.96 117.01 2515.57 103.7 2542.27 94.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2542.98 96.59 2548.76 91.94 2541.34 91.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2508.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="2508.5,112.5",
		pos="e,2550.2,91.434 2453.8,125.58 2478,117.01 2515.6,103.7 2542.3,94.236"];
	annotated_filter_index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 2429.59 125.55 2428.6 105.35 2426.1 54 2424.8 27.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2427.26 27.57 2424.47 20.7 2422.37 27.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2434.5 80.1 0 13 3 -vcf ",
		label=vcf,
		lp="2434.5,82",
		pos="e,2424.4,19.19 2429.6,125.55 2428.6,105.35 2426.1,54.002 2424.8,27.454"];
	annotated_filter_bgzip -> annotated_filter_index	[_draw_="c 7 -#000000 B 4 2430 170.71 2430 165.59 2430 158.85 2430 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2432.45 152.78 2430 145.78 2427.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2436.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="2436.5,157.5",
		pos="e,2430,144.27 2430,170.71 2430,165.59 2430,158.85 2430,152.67"];
	mutect -> mutect_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 807.49 620.57 789.85 614.48 775 604.01 775 586 775 586 775 586 775 134 775 116.15 759.49 103.4 743.98 95.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 745.16 92.96 737.8 92.07 743 97.36 ",
		pos="e,736.44,91.397 807.49,620.57 789.85,614.48 775,604.01 775,586 775,586 775,586 775,134 775,116.15 759.49,103.4 743.98,95.111"];
	mutect -> mutect_filtered_vcf	[_draw_="c 7 -#000000 B 10 859.94 620.77 855.25 612.36 849 598.74 849 586 849 586 849 586 849 134 849 122.01 845.14 109.05 841.33 99.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 843.63 98.36 838.68 92.84 839.11 100.24 ",
		pos="e,838.1,91.44 859.94,620.77 855.25,612.36 849,598.74 849,586 849,586 849,586 849,134 849,122.01 845.14,109.05 841.33,99.197"];
	mutect -> combine	[_draw_="c 7 -#000000 B 4 928.42 620.5 981.95 613.33 1058.55 603.07 1114.3 595.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1114.6 598.04 1121.21 594.68 1113.95 593.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1076.5 605.6 0 45 10 -mutect_vcf ",
		label=mutect_vcf,
		lp="1076.5,607.5",
		pos="e,1122.7,594.48 928.42,620.5 981.95,613.33 1058.6,603.07 1114.3,595.6"];
	decompose_index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1635 485.5 1635 504.5 1697 504.5 1697 485.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1666 492.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="1666,495",
		rects="1635,485.5,1697,504.5",
		width=0.86111];
	decompose -> decompose_index	[_draw_="c 7 -#000000 B 4 1640.98 530.71 1645.01 525.12 1650.44 517.58 1655.22 510.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1657.05 512.6 1659.16 505.49 1653.08 509.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1659.5 515.6 0 13 3 -vcf ",
		label=vcf,
		lp="1659.5,517.5",
		pos="e,1660,504.27 1641,530.71 1645,525.12 1650.4,517.58 1655.2,510.96"];
	add_vep_fields_to_table -> final_tsv	[_draw_="c 7 -#000000 B 7 2369.42 19.43 2347.35 24.52 2322.33 32.52 2302 45 2293.33 50.32 2285.53 58.56 2279.7 65.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2277.75 64.34 2275.48 71.4 2281.66 67.3 ",
		pos="e,2274.6,72.602 2369.4,19.43 2347.3,24.516 2322.3,32.524 2302,45 2293.3,50.321 2285.5,58.563 2279.7,65.82"];
	tumor_bam_readcount -> tumor_indel_bam_readcount_tsv	[_draw_="c 7 -#000000 B 16 2027.64 395.53 2022.6 393.14 2017.43 390.28 2013 387 1995.28 373.9 1995.57 365.59 1980 350 1963.99 333.96 1942 \
338.66 1942 316 1942 316 1942 316 1942 134 1942 120.44 1934.03 107.31 1926.3 97.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1928.28 96.31 1921.83 92.64 1924.59 99.53 ",
		pos="e,1920.8,91.499 2027.6,395.53 2022.6,393.14 2017.4,390.28 2013,387 1995.3,373.9 1995.6,365.59 1980,350 1964,333.96 1942,338.66 1942,\
316 1942,316 1942,316 1942,134 1942,120.44 1934,107.31 1926.3,97.768"];
	tumor_bam_readcount -> tumor_snv_bam_readcount_tsv	[_draw_="c 7 -#000000 B 13 2030.38 395.59 2026.55 393.25 2022.84 390.4 2020 387 1999.71 362.77 2016 347.61 2016 316 2016 316 2016 316 2016 \
134 2016 114.93 2032.95 102.39 2050.52 94.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2051.1 96.94 2056.64 92.01 2049.24 92.4 ",
		pos="e,2058,91.432 2030.4,395.59 2026.6,393.25 2022.8,390.4 2020,387 1999.7,362.77 2016,347.61 2016,316 2016,316 2016,316 2016,134 2016,\
114.93 2033,102.39 2050.5,94.524"];
	tumor_bam_readcount -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2032.05 395.5 2024.11 390.61 2017.65 384.21 2023 378 2024.85 375.85 2027.71 373.96 2031.31 372.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2031.98 374.68 2037.69 369.95 2030.28 370.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2075 380.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="2075,382.5",
		pos="e,2039.1,369.43 2032,395.5 2024.1,390.61 2017.7,384.21 2023,378 2024.9,375.85 2027.7,373.96 2031.3,372.31"];
	tumor_bam_readcount -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2104.81 397.47 2111.75 394.96 2118.37 391.57 2124 387 2127.12 384.46 2129.47 380.93 2131.22 377.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2133.46 378.3 2133.64 370.89 2128.87 376.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2179 380.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="2179,382.5",
		pos="e,2134.2,369.47 2104.8,397.47 2111.7,394.96 2118.4,391.57 2124,387 2127.1,384.46 2129.5,380.93 2131.2,377.29"];
	decompose_index -> annotate_variants	[_draw_="c 7 -#000000 B 7 1678.83 485.65 1688.81 479.62 1703.22 471.87 1717 468 1729.38 464.52 1789.06 460.04 1843.28 456.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1843.24 459.01 1850.07 456.12 1842.93 454.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1723.5 470.6 0 13 3 -vcf ",
		label=vcf,
		lp="1723.5,472.5",
		pos="e,1851.6,456.02 1678.8,485.65 1688.8,479.62 1703.2,471.87 1717,468 1729.4,464.52 1789.1,460.04 1843.3,456.55"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2448 260.5 2448 279.5 2556 279.5 2556 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2502 267.5 0 92 14 -\"NORMAL,TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL,TUMOR\"",
		pos="2502,270",
		rects="2448,260.5,2556,279.5",
		width=1.5];
	default1 -> filter_vcf	[_draw_="c 7 -#000000 B 4 2487.78 260.5 2477.42 254.32 2463.22 245.84 2451.48 238.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2452.76 236.74 2445.49 235.25 2450.25 240.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2503 245.6 0 62 12 -sample_names ",
		label=sample_names,
		lp="2503,247.5",
		pos="e,2444.2,234.48 2487.8,260.5 2477.4,254.32 2463.2,245.84 2451.5,238.83"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2262 350.5 2262 369.5 2330 369.5 2330 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2296 357.5 0 52 8 -\"NORMAL\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL\"",
		pos="2296,360",
		rects="2262,350.5,2330,369.5",
		width=0.94444];
	default2 -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 4 2266.17 350.5 2242.28 343.7 2208.62 334.12 2182.84 326.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2183.63 324.45 2176.23 324.89 2182.29 329.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2263 335.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2263,337.5",
		pos="e,2174.8,324.48 2266.2,350.5 2242.3,343.7 2208.6,334.12 2182.8,326.78"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2334.5 350.5 2334.5 369.5 2381.5 369.5 2381.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2358 357.5 0 31 5 -\"DNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"DNA\"",
		pos="2358,360",
		rects="2334.5,350.5,2381.5,369.5",
		width=0.65278];
	default3 -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2340.49 350.51 2327.65 344.66 2309.62 337.2 2293 333 2281.69 330.14 2269.78 327.77 2257.82 325.79 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2258.33 323.39 2251.03 324.72 2257.56 328.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2340.5 335.6 0 41 9 -data_type ",
		label=data_type,
		lp="2340.5,337.5",
		pos="e,2249.5,324.48 2340.5,350.51 2327.6,344.66 2309.6,337.2 2293,333 2281.7,330.14 2269.8,327.77 2257.8,325.79"];
	default4	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2302 395.5 2302 414.5 2364 414.5 2364 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2333 402.5 0 46 7 -\"TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"TUMOR\"",
		pos="2333,405",
		rects="2302,395.5,2364,414.5",
		width=0.86111];
	default4 -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2322.9 395.73 2315 389.74 2303.46 382.01 2292 378 2283.77 375.12 2269.9 372.61 2253.72 370.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2254.36 368.09 2247.11 369.65 2253.75 372.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2338 380.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2338,382.5",
		pos="e,2245.6,369.46 2322.9,395.73 2315,389.74 2303.5,382.01 2292,378 2283.8,375.12 2269.9,372.61 2253.7,370.48"];
	default5	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2215.5 395.5 2215.5 414.5 2262.5 414.5 2262.5 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2239 402.5 0 31 5 -\"DNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"DNA\"",
		pos="2239,405",
		rects="2215.5,395.5,2262.5,414.5",
		width=0.65278];
	default5 -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2237.96 395.73 2236.79 389.9 2234.29 382.38 2229 378 2226 375.52 2220.92 373.37 2214.64 371.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2215.61 369.24 2208.22 369.86 2214.38 373.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2255.5 380.6 0 41 9 -data_type ",
		label=data_type,
		lp="2255.5,382.5",
		pos="e,2206.8,369.48 2238,395.73 2236.8,389.9 2234.3,382.38 2229,378 2226,375.52 2220.9,373.37 2214.6,371.52"];
	default6	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1627 440.5 1627 459.5 1695 459.5 1695 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1661 447.5 0 52 8 -\"NORMAL\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL\"",
		pos="1661,450",
		rects="1627,440.5,1695,459.5",
		width=0.94444];
	default6 -> normal_bam_readcount	[_draw_="c 7 -#000000 B 4 1658.3 440.71 1656.6 435.47 1654.34 428.53 1652.29 422.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1654.66 421.6 1650.16 415.7 1650 423.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1670.5 425.6 0 31 6 -sample ",
		label=sample,
		lp="1670.5,427.5",
		pos="e,1649.7,414.27 1658.3,440.71 1656.6,435.47 1654.3,428.53 1652.3,422.24"];
	default7	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2039 440.5 2039 459.5 2101 459.5 2101 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2070 447.5 0 46 7 -\"TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"TUMOR\"",
		pos="2070,450",
		rects="2039,440.5,2101,459.5",
		width=0.86111];
	default7 -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 4 2066.14 440.71 2063.65 435.36 2060.33 428.22 2057.35 421.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2059.66 420.95 2054.48 415.64 2055.21 423.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2076.5 425.6 0 31 6 -sample ",
		label=sample,
		lp="2076.5,427.5",
		pos="e,2053.8,414.27 2066.1,440.71 2063.7,435.36 2060.3,428.22 2057.4,421.81"];
}