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			fillcolor="#94DDF4",
			height=0.27778,
			label=net_chop_threshold,
			pos="2730,376",
			rects="2674,366.5,2786,385.5",
			width=1.5556];
		minimum_fold_change	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 162 366.5 162 385.5 290 385.5 290 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 226 373.5 0 112 19 -minimum_fold_change ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=minimum_fold_change,
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			rects="162,366.5,290,385.5",
			width=1.7778];
		variants_to_table_genotype_fields	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 4079 366.5 4079 385.5 4263 385.5 4263 366.5 ",
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			label=variants_to_table_genotype_fields,
			pos="4171,376",
			rects="4079,366.5,4263,385.5",
			width=2.5556];
		normal_vaf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 294 366.5 294 385.5 366 385.5 366 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 330 373.5 0 56 10 -normal_vaf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_vaf,
			pos="330,376",
			rects="294,366.5,366,385.5",
			width=1];
		exclude_nas	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 370.5 366.5 370.5 385.5 447.5 385.5 447.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 409 373.5 0 61 11 -exclude_nas ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=exclude_nas,
			pos="409,376",
			rects="370.5,366.5,447.5,385.5",
			width=1.0694];
		maximum_transcript_support_level	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 452 366.5 452 385.5 642 385.5 642 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 547 373.5 0 174 32 -maximum_transcript_support_level ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=maximum_transcript_support_level,
			pos="547,376",
			rects="452,366.5,642,385.5",
			width=2.6389];
	}
	pvacseq	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1710 88.5 1710 107.5 1788 107.5 1788 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1749 95.5 0 62 11 -run pVACseq ",
		height=0.27778,
		label="run pVACseq",
		pos="1749,98",
		rects="1710,88.5,1788,107.5",
		width=1.0833];
	epitope_lengths -> pvacseq	[_draw_="c 7 -#000000 B 13 700.53 366.5 707.33 356.78 717 340.12 717 324 717 324 717 324 717 142 717 77.84 795.16 122.41 859 116 1024.79 \
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		label=epitope_lengths,
		lp="750.5,233",
		pos="e,1710.2,98.905 700.53,366.5 707.33,356.78 717,340.12 717,324 717,324 717,324 717,142 717,77.84 795.16,122.41 859,116 1024.8,99.349 \
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	n_threads -> pvacseq	[_draw_="c 7 -#000000 B 10 787.43 366.62 796.87 357.25 810 341.14 810 324 810 324 810 324 810 142 810 96.87 1511.22 97.63 1701.73 98.67 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 830.5 231.1 0 41 9 -n_threads ",
		label=n_threads,
		lp="830.5,233",
		pos="e,1710.1,98.715 787.43,366.62 796.87,357.25 810,341.14 810,324 810,324 810,324 810,142 810,96.872 1511.2,97.629 1701.7,98.667"];
	net_chop_method -> pvacseq	[_draw_="c 7 -#000000 B 13 894.62 366.59 903.66 363.84 913.76 360.78 923 358 973.63 342.77 1037 376.87 1037 324 1037 324 1037 324 1037 142 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.72 101.83 1708.7 99.31 1701.68 96.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1073.5 231.1 0 73 15 -net_chop_method ",
		label=net_chop_method,
		lp="1073.5,233",
		pos="e,1710.2,99.296 894.62,366.59 903.66,363.84 913.76,360.78 923,358 973.63,342.77 1037,376.87 1037,324 1037,324 1037,324 1037,142 \
1037,108.58 1543.4,100.95 1702,99.375"];
	add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3467.5 178.5 3467.5 197.5 3610.5 197.5 3610.5 178.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3539 185.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="3539,188",
		rects="3467.5,178.5,3610.5,197.5",
		width=1.9861];
	expression_tool -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 3720.29 366.52 3711.75 363.62 3702 360.49 3693 358 3659.22 348.67 3539 359.05 3539 324 3539 324 3539 324 3539 \
232 3539 223.31 3539 213.63 3539 205.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3541.45 205.76 3539 198.76 3536.55 205.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3571 276.1 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="3571,278",
		pos="e,3539,197.24 3720.3,366.52 3711.7,363.62 3702,360.49 3693,358 3659.2,348.67 3539,359.05 3539,324 3539,324 3539,324 3539,232 3539,\
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	add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3285.5 223.5 3285.5 242.5 3428.5 242.5 3428.5 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3357 230.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="3357,233",
		rects="3285.5,223.5,3428.5,242.5",
		width=1.9861];
	expression_tool -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 3723 366.57 3713.92 363.31 3703.09 359.9 3693 358 3658.45 351.49 3568.44 360.86 3535 350 3467.45 328.06 3400.81 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3373.69 246.09 3366.85 243.22 3370.41 249.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3477 298.6 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="3477,300.5",
		pos="e,3365.7,242.21 3723,366.57 3713.9,363.31 3703.1,359.9 3693,358 3658.5,351.49 3568.4,360.86 3535,350 3467.4,328.06 3400.8,273.49 \
3371.9,247.8"];
	additional_report_columns -> pvacseq	[_draw_="c 7 -#000000 B 10 1030.23 366.54 1073.38 355.38 1142 335.78 1142 324 1142 324 1142 324 1142 142 1142 113.97 1559.34 102.86 1701.92 \
99.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.64 102.34 1708.59 99.74 1701.54 97.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1196.5 231.1 0 109 25 -additional_report_columns ",
		label=additional_report_columns,
		lp="1196.5,233",
		pos="e,1710.1,99.713 1030.2,366.54 1073.4,355.38 1142,335.78 1142,324 1142,324 1142,324 1142,142 1142,113.97 1559.3,102.86 1701.9,99.882"];
	peptide_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 13 94.38 366.64 102.07 357.04 113 340.5 113 324 113 324 113 324 113 142 113 60.29 213.53 122.27 295 116 437.65 105.02 \
1467.86 100.16 1701.82 99.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.62 101.64 1708.61 99.16 1701.6 96.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 166 231.1 0 106 23 -peptide_sequence_length ",
		label=peptide_sequence_length,
		lp="166,233",
		pos="e,1710.1,99.152 94.381,366.64 102.07,357.04 113,340.5 113,324 113,324 113,324 113,142 113,60.29 213.53,122.27 295,116 437.65,105.02 \
1467.9,100.16 1701.8,99.186"];
	normal_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 1408.1 366.76 1410.47 356.73 1414 339.24 1414 324 1414 324 1414 324 1414 142 1414 113.32 1609.65 103.36 1701.91 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.81 102.72 1708.73 100.04 1701.66 97.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1437.5 231.1 0 47 10 -normal_cov ",
		label=normal_cov,
		lp="1437.5,233",
		pos="e,1710.2,99.99 1408.1,366.76 1410.5,356.73 1414,339.24 1414,324 1414,324 1414,324 1414,142 1414,113.32 1609.7,103.36 1701.9,100.26"];
	trna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 1481.1 366.56 1485.54 356.62 1492 339.51 1492 324 1492 324 1492 324 1492 142 1492 120.96 1627.78 107.79 1701.96 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.94 104.62 1708.74 101.66 1701.57 99.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1509.5 231.1 0 35 8 -trna_cov ",
		label=trna_cov,
		lp="1509.5,233",
		pos="e,1710.2,101.54 1481.1,366.56 1485.5,356.62 1492,339.51 1492,324 1492,324 1492,324 1492,142 1492,120.96 1627.8,107.79 1702,102.16"];
	sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 2810.4 366.6 2784.92 356.4 2747 338.75 2747 324 2747 324 2747 324 2747 142 2747 103.56 2614.3 119.29 2576 116 \
2422.94 102.85 1948.06 99.81 1796.21 99.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.47 96.71 1789.46 99.13 1796.45 101.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2776 231.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2776,233",
		pos="e,1787.9,99.127 2810.4,366.6 2784.9,356.4 2747,338.75 2747,324 2747,324 2747,324 2747,142 2747,103.56 2614.3,119.29 2576,116 2422.9,\
102.85 1948.1,99.805 1796.2,99.161"];
	add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3139 268.5 3139 287.5 3383 287.5 3383 268.5 ",
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		fillcolor="#F3CEA1",
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		label="Add snv and indel bam-readcount files to a vcf",
		pos="3261,278",
		rects="3139,268.5,3383,287.5",
		width=3.3889];
	sample_name -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 2856.21 366.61 2875.8 359.53 2900.85 350.46 2902 350 2957.02 327.89 2966.46 310.33 3024 296 3044.68 290.85 3087.29 \
287.08 3130.74 284.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3130.8 286.88 3137.64 284.02 3130.51 281.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3004 321.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="3004,323",
		pos="e,3139.2,283.93 2856.2,366.61 2875.8,359.53 2900.9,350.46 2902,350 2957,327.89 2966.5,310.33 3024,296 3044.7,290.85 3087.3,287.08 \
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	sample_name -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2833 366.7 2833 356.6 2833 339.05 2833 324 2833 324 2833 324 2833 232 2833 200.92 3274.8 192.1 3459.42 189.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3459.26 192.23 3466.23 189.69 3459.2 187.33 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2862 276.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2862,278",
		pos="e,3467.7,189.67 2833,366.7 2833,356.6 2833,339.05 2833,324 2833,324 2833,324 2833,232 2833,200.92 3274.8,192.1 3459.4,189.78"];
	sample_name -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 2841.18 366.7 2857.51 350.6 2895.95 315.06 2935 296 2980.33 273.87 2995.86 279.41 3045 268 3080.83 259.68 3089.58 \
256.14 3126 251 3176.03 243.94 3232.6 239.72 3277.24 237.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3277.34 239.69 3284.2 236.87 3277.08 234.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2964 298.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2964,300.5",
		pos="e,3285.7,236.79 2841.2,366.7 2857.5,350.6 2896,315.06 2935,296 2980.3,273.87 2995.9,279.41 3045,268 3080.8,259.68 3089.6,256.14 \
3126,251 3176,243.94 3232.6,239.72 3277.2,237.24"];
	tumor_rna_bam_readcount	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3124 313.5 3124 332.5 3264 332.5 3264 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3194 320.5 0 124 22 -bam_readcount workflow ",
		fillcolor="#F3CEA1",
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		label="bam_readcount workflow",
		pos="3194,323",
		rects="3124,313.5,3264,332.5",
		width=1.9444];
	sample_name -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 10 2852.79 366.56 2861.06 363.38 2870.85 360.03 2880 358 2918.34 349.47 2928.93 354.02 2968 350 3017.18 344.94 3072.3 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3115.89 335.92 3122.55 332.66 3115.31 331.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3063.5 343.6 0 31 6 -sample ",
		label=sample,
		lp="3063.5,345.5",
		pos="e,3124.1,332.48 2852.8,366.56 2861.1,363.38 2870.9,360.03 2880,358 2918.3,349.47 2928.9,354.02 2968,350 3017.2,344.94 3072.3,338.61 \
3115.8,333.46"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3575.5 88.5 3575.5 107.5 3716.5 107.5 3716.5 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3646 95.5 0 125 25 -SelectVariants (GATK 3.6) ",
		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="3646,98",
		rects="3575.5,88.5,3716.5,107.5",
		width=1.9583];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 3984.56 366.6 3967 358.64 3946 344.77 3946 324 3946 324 3946 324 3946 142 3946 119.64 3813.68 108.01 3724.8 102.73 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3957.5 231.1 0 23 6 -fields ",
		label=fields,
		lp="3957.5,233",
		pos="e,3716.3,102.23 3984.6,366.6 3967,358.64 3946,344.77 3946,324 3946,324 3946,324 3946,142 3946,119.64 3813.7,108.01 3724.8,102.73"];
	reference_fasta -> variants_to_table	[_draw_="c 7 -#000000 B 10 3646 366.7 3646 356.6 3646 339.05 3646 324 3646 324 3646 324 3646 142 3646 133.31 3646 123.63 3646 115.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3648.45 115.76 3646 108.76 3643.55 115.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3666 231.1 0 40 9 -reference ",
		label=reference,
		lp="3666,233",
		pos="e,3646,107.24 3646,366.7 3646,356.6 3646,339.05 3646,324 3646,324 3646,324 3646,142 3646,133.31 3646,123.63 3646,115.65"];
	reference_fasta -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 13 3625.92 366.68 3616.93 363.34 3606.1 359.86 3596 358 3547.45 349.07 3420.54 366.45 3374 350 3367.71 347.78 3368.21 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3272.24 327.55 3265.06 329.4 3271.83 332.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3406.5 343.6 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="3406.5,345.5",
		pos="e,3263.6,329.28 3625.9,366.68 3616.9,363.34 3606.1,359.86 3596,358 3547.4,349.07 3420.5,366.45 3374,350 3367.7,347.78 3368.2,343.42 \
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	readcount_minimum_mapping_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 13 3445.63 366.51 3427.36 363.47 3406.25 360.25 3387 358 3362.88 355.19 3300.74 358.52 3278 350 3271.76 347.66 3272.04 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3251.04 332.56 3243.64 332.9 3249.64 337.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3321.5 343.6 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="3321.5,345.5",
		pos="e,3242.2,332.46 3445.6,366.51 3427.4,363.47 3406.3,360.25 3387,358 3362.9,355.19 3300.7,358.52 3278,350 3271.8,347.66 3272,343.83 \
3266,341 3261,338.66 3255.6,336.63 3250.2,334.86"];
	transcript_expression_file -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 3832.7 366.54 3800 357.23 3755 341.28 3755 324 3755 324 3755 324 3755 232 3755 203.18 3680.12 193.39 3618.53 190.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3618.95 187.78 3611.84 189.9 3618.71 192.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3785.5 276.1 0 61 15 -expression_file ",
		label=expression_file,
		lp="3785.5,278",
		pos="e,3610.3,189.83 3832.7,366.54 3800,357.23 3755,341.28 3755,324 3755,324 3755,324 3755,232 3755,203.18 3680.1,193.39 3618.5,190.22"];
	tdna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 1551.31 366.8 1561.64 357.59 1576 341.61 1576 324 1576 324 1576 324 1576 142 1576 115.98 1650.63 105.59 1701.85 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.87 103.98 1708.67 101.01 1701.5 99.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1594.5 231.1 0 37 8 -tdna_cov ",
		label=tdna_cov,
		lp="1594.5,233",
		pos="e,1710.2,100.9 1551.3,366.8 1561.6,357.59 1576,341.61 1576,324 1576,324 1576,324 1576,142 1576,115.98 1650.6,105.59 1701.9,101.52"];
	rnaseq_bam -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3160.15 366.78 3161.51 359.44 3164.34 348.7 3170 341 3170.83 339.87 3171.76 338.78 3172.76 337.75 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3179.5 343.6 0 19 3 -bam ",
		label=bam,
		lp="3179.5,345.5",
		pos="e,3179,332.39 3160.2,366.78 3161.5,359.44 3164.3,348.7 3170,341 3170.8,339.87 3171.8,338.78 3172.8,337.75"];
	tdna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 1612.1 366.59 1619.49 356.95 1630 340.37 1630 324 1630 324 1630 324 1630 142 1630 126 1668.52 114.29 1701.73 107.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1702.19 109.57 1708.55 105.76 1701.2 104.77 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1648 231.1 0 36 8 -tdna_vaf ",
		label=tdna_vaf,
		lp="1648,233",
		pos="e,1710,105.45 1612.1,366.59 1619.5,356.95 1630,340.37 1630,324 1630,324 1630,324 1630,142 1630,126 1668.5,114.29 1701.7,107.16"];
	prediction_algorithms -> pvacseq	[_draw_="c 7 -#000000 B 10 1700 366.7 1700 356.6 1700 339.05 1700 324 1700 324 1700 324 1700 142 1700 128.82 1710.14 118.73 1721.2 111.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1722.36 113.81 1727.19 108.18 1719.91 109.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1744.5 231.1 0 89 21 -prediction_algorithms ",
		label=prediction_algorithms,
		lp="1744.5,233",
		pos="e,1728.5,107.43 1700,366.7 1700,356.6 1700,339.05 1700,324 1700,324 1700,324 1700,142 1700,128.82 1710.1,118.73 1721.2,111.65"];
	fasta_size -> pvacseq	[_draw_="c 7 -#000000 B 10 1798.74 366.7 1798.44 356.6 1798 339.05 1798 324 1798 324 1798 324 1798 142 1798 128.82 1787.86 118.73 1776.8 \
111.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1778.09 109.57 1770.81 108.18 1775.64 113.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1819 231.1 0 42 10 -fasta_size ",
		label=fasta_size,
		lp="1819,233",
		pos="e,1769.5,107.43 1798.7,366.7 1798.4,356.6 1798,339.05 1798,324 1798,324 1798,324 1798,142 1798,128.82 1787.9,118.73 1776.8,111.65"];
	phased_proximal_variants_vcf -> pvacseq	[_draw_="c 7 -#000000 B 10 1908 366.52 1897.42 357.32 1883 341.56 1883 324 1883 324 1883 324 1883 142 1883 123.18 1834.48 111.44 1795.83 \
105.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.55 102.71 1789.25 104.03 1795.78 107.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1944 231.1 0 122 28 -phased_proximal_variants_vcf ",
		label=phased_proximal_variants_vcf,
		lp="1944,233",
		pos="e,1787.8,103.8 1908,366.52 1897.4,357.32 1883,341.56 1883,324 1883,324 1883,324 1883,142 1883,123.18 1834.5,111.44 1795.8,105.07"];
	gene_expression_file -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2973.03 366.57 2994.21 360.88 3018.4 353.76 3022 350 3039.16 332.1 3018.62 313.68 3036 296 3068.93 262.51 3193.43 \
246.41 3277.34 239.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3277.31 241.67 3284.08 238.65 3276.9 236.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3066.5 298.6 0 61 15 -expression_file ",
		label=expression_file,
		lp="3066.5,300.5",
		pos="e,3285.6,238.52 2973,366.57 2994.2,360.88 3018.4,353.76 3022,350 3039.2,332.1 3018.6,313.68 3036,296 3068.9,262.51 3193.4,246.41 \
3277.3,239.21"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3503.5 35.5 3503.5 54.5 3660.5 54.5 3660.5 35.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3582 42.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="3582,45",
		rects="3503.5,35.5,3660.5,54.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 10 4299.42 366.5 4273.35 356.37 4235 338.92 4235 324 4235 324 4235 324 4235 97 4235 68.93 3846.38 53.82 3668.74 48.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3669.03 45.93 3661.96 48.17 3668.88 50.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4256 208.6 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="4256,210.5",
		pos="e,3660.4,48.124 4299.4,366.5 4273.4,356.37 4235,338.92 4235,324 4235,324 4235,324 4235,97 4235,68.928 3846.4,53.817 3668.7,48.375"];
	normal_sample_name -> pvacseq	[_draw_="c 7 -#000000 B 10 2061.05 366.74 2052.77 357.23 2041 340.77 2041 324 2041 324 2041 324 2041 142 2041 117.56 1878.88 105.67 1796.24 \
101.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.41 98.75 1789.29 100.83 1796.15 103.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2086 231.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="2086,233",
		pos="e,1787.8,100.75 2061.1,366.74 2052.8,357.23 2041,340.77 2041,324 2041,324 2041,324 2041,142 2041,117.56 1878.9,105.67 1796.2,101.19"];
	netmhc_stab -> pvacseq	[_draw_="c 7 -#000000 B 10 2171.08 366.66 2165.75 356.81 2158 339.77 2158 324 2158 324 2158 324 2158 142 2158 105.98 1903.89 100.03 1796.26 \
99.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.38 96.67 1789.36 99.07 1796.34 101.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2184.5 231.1 0 53 11 -netmhc_stab ",
		label=netmhc_stab,
		lp="2184.5,233",
		pos="e,1787.8,99.06 2171.1,366.66 2165.8,356.81 2158,339.77 2158,324 2158,324 2158,324 2158,142 2158,105.98 1903.9,100.03 1796.3,99.123"];
	downstream_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 13 2278.82 366.55 2261.06 358.62 2240 344.83 2240 324 2240 324 2240 324 2240 142 2240 86.56 2172.99 123.08 2118 116 \
2003.09 101.21 1866.6 98.83 1796.21 98.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.48 96.26 1789.48 98.7 1796.48 101.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2303 231.1 0 126 26 -downstream_sequence_length ",
		label=downstream_sequence_length,
		lp="2303,233",
		pos="e,1788,98.703 2278.8,366.55 2261.1,358.62 2240,344.83 2240,324 2240,324 2240,324 2240,142 2240,86.56 2173,123.08 2118,116 2003.1,\
101.21 1866.6,98.828 1796.2,98.708"];
	readcount_minimum_base_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3222.56 366.57 3213.28 362.75 3204.69 357.41 3198 350 3195.66 347.4 3194.36 344.04 3193.69 340.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3196.14 340.57 3193.19 333.76 3191.26 340.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3233.5 343.6 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="3233.5,345.5",
		pos="e,3193.1,332.25 3222.6,366.57 3213.3,362.75 3204.7,357.41 3198,350 3195.7,347.4 3194.4,344.04 3193.7,340.59"];
	detect_variants_vcf -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3082.13 366.58 3104.53 358.05 3139.32 344.81 3164.16 335.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3164.75 337.75 3170.43 332.97 3163.01 333.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3152.5 343.6 0 13 3 -vcf ",
		label=vcf,
		lp="3152.5,345.5",
		pos="e,3171.8,332.43 3082.1,366.58 3104.5,358.05 3139.3,344.81 3164.2,335.36"];
	alleles -> pvacseq	[_draw_="c 7 -#000000 B 10 2405.77 366.79 2397.19 357.33 2385 340.91 2385 324 2385 324 2385 324 2385 142 2385 112.5 1943.67 102.31 1796.28 \
99.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.38 97.28 1789.34 99.61 1796.3 102.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2399 231.1 0 28 7 -alleles ",
		label=alleles,
		lp="2399,233",
		pos="e,1787.8,99.584 2405.8,366.79 2397.2,357.33 2385,340.91 2385,324 2385,324 2385,324 2385,142 2385,112.5 1943.7,102.31 1796.3,99.729"];
	expn_val -> pvacseq	[_draw_="c 7 -#000000 B 10 2468.35 366.62 2463.32 356.74 2456 339.68 2456 324 2456 324 2456 324 2456 142 2456 108.83 1953.77 101.03 1795.9 \
99.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.3 96.95 1789.28 99.33 1796.25 101.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2474 231.1 0 36 8 -expn_val ",
		label=expn_val,
		lp="2474,233",
		pos="e,1787.8,99.313 2468.4,366.62 2463.3,356.74 2456,339.68 2456,324 2456,324 2456,324 2456,142 2456,108.83 1953.8,101.03 1795.9,99.395"];
	top_score_metric -> pvacseq	[_draw_="c 7 -#000000 B 10 2546.09 366.72 2534.62 357.68 2519 342.06 2519 324 2519 324 2519 324 2519 142 2519 105.61 1963.42 100.01 1796.11 \
99.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.5 96.71 1789.49 99.12 1796.48 101.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2554 231.1 0 70 16 -top_score_metric ",
		label=top_score_metric,
		lp="2554,233",
		pos="e,1788,99.116 2546.1,366.72 2534.6,357.68 2519,342.06 2519,324 2519,324 2519,324 2519,142 2519,105.61 1963.4,100.01 1796.1,99.156"];
	trna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 2629.09 366.72 2617.62 357.68 2602 342.06 2602 324 2602 324 2602 324 2602 142 2602 101.33 1975.43 98.79 1796.3 \
98.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.38 96.44 1789.38 98.9 1796.38 101.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2619 231.1 0 34 8 -trna_vaf ",
		label=trna_vaf,
		lp="2619,233",
		pos="e,1787.9,98.899 2629.1,366.72 2617.6,357.68 2602,342.06 2602,324 2602,324 2602,324 2602,142 2602,101.33 1975.4,98.788 1796.3,98.892"];
	net_chop_threshold -> pvacseq	[_draw_="c 7 -#000000 B 10 2696 366.59 2675.38 359.22 2653 346.13 2653 324 2653 324 2653 324 2653 142 2653 98.69 1982.33 98.09 1796.33 98.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.35 96.3 1789.36 98.78 1796.37 101.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2693.5 231.1 0 81 18 -net_chop_threshold ",
		label=net_chop_threshold,
		lp="2693.5,233",
		pos="e,1787.8,98.785 2696,366.59 2675.4,359.22 2653,346.13 2653,324 2653,324 2653,324 2653,142 2653,98.693 1982.3,98.088 1796.3,98.753"];
	minimum_fold_change -> pvacseq	[_draw_="c 7 -#000000 B 13 252.87 366.51 271.51 358.74 293 345.2 293 324 293 324 293 324 293 142 293 79.59 368.9 122.2 431 116 559.15 103.2 \
1481.11 99.77 1701.68 99.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.64 101.57 1708.63 99.1 1701.62 96.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 339 231.1 0 92 19 -minimum_fold_change ",
		label=minimum_fold_change,
		lp="339,233",
		pos="e,1710.1,99.099 252.87,366.51 271.51,358.74 293,345.2 293,324 293,324 293,324 293,142 293,79.588 368.9,122.2 431,116 559.15,103.2 \
1481.1,99.766 1701.7,99.124"];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 4118.24 366.53 4095.49 359.57 4074 346.93 4074 324 4074 324 4074 324 4074 142 4074 107.28 3848.12 100.31 3724.55 \
99.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3724.73 96.65 3717.71 99.04 3724.69 101.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4107 231.1 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="4107,233",
		pos="e,3716.2,99.023 4118.2,366.53 4095.5,359.57 4074,346.93 4074,324 4074,324 4074,324 4074,142 4074,107.28 3848.1,100.31 3724.5,99.098"];
	normal_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 349.89 366.63 378.01 354.5 426 332.54 426 324 426 324 426 324 426 142 426 106.3 466.82 122.1 502 116 621.61 95.27 \
1488.66 97.81 1701.78 98.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.74 101.21 1708.75 98.79 1701.76 96.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 449 231.1 0 46 10 -normal_vaf ",
		label=normal_vaf,
		lp="449,233",
		pos="e,1710.3,98.802 349.89,366.63 378.01,354.5 426,332.54 426,324 426,324 426,324 426,142 426,106.3 466.82,122.1 502,116 621.61,95.268 \
1488.7,97.814 1701.8,98.763"];
	exclude_nas -> pvacseq	[_draw_="c 7 -#000000 B 13 426.81 366.69 452.52 354.42 497 332.03 497 324 497 324 497 324 497 142 497 109.64 533.22 122.1 565 116 621.6 105.13 \
1487.69 100.26 1701.54 99.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.55 101.67 1708.54 99.18 1701.53 96.77 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 522.5 231.1 0 51 11 -exclude_nas ",
		label=exclude_nas,
		lp="522.5,233",
		pos="e,1710.1,99.177 426.81,366.69 452.52,354.42 497,332.03 497,324 497,324 497,324 497,142 497,109.64 533.22,122.1 565,116 621.6,105.13 \
1487.7,100.26 1701.5,99.218"];
	maximum_transcript_support_level -> pvacseq	[_draw_="c 7 -#000000 B 13 551.65 366.62 556.68 356.74 564 339.68 564 324 564 324 564 324 564 142 564 72.15 649.44 122.37 719 116 913.52 \
98.18 1526 98.39 1701.55 98.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.54 101.29 1708.54 98.86 1701.55 96.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 635 231.1 0 142 32 -maximum_transcript_support_level ",
		label=maximum_transcript_support_level,
		lp="635,233",
		pos="e,1710.1,98.862 551.65,366.62 556.68,356.74 564,339.68 564,324 564,324 564,324 564,142 564,72.149 649.44,122.37 719,116 913.52,98.182 \
1526,98.394 1701.5,98.84"];
	pvacseq -> mhc_ii_filtered_epitopes	[_draw_="c 7 -#000000 B 4 1773.44 88.58 1798.4 79.98 1837.28 66.58 1864.75 57.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1865.27 59.52 1871.09 54.93 1863.68 54.89 ",
		pos="e,1872.5,54.434 1773.4,88.578 1798.4,79.978 1837.3,66.58 1864.7,57.114"];
	pvacseq -> mhc_i_all_epitopes	[_draw_="c 7 -#000000 B 7 1787.9 92.36 1831.36 86.83 1903.66 76.61 1965 63 1972.96 61.23 1981.43 59 1989.4 56.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1989.66 59.22 1995.71 54.92 1988.3 54.52 ",
		pos="e,1997.2,54.497 1787.9,92.359 1831.4,86.832 1903.7,76.608 1965,63 1973,61.234 1981.4,59.005 1989.4,56.748"];
	pvacseq -> combined_all_epitopes	[_draw_="c 7 -#000000 B 7 1787.98 94.8 1850.11 90.9 1975.31 81.37 2080 63 2089.83 61.28 2100.35 58.91 2110.09 56.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2110.42 58.94 2116.6 54.84 2109.22 54.19 ",
		pos="e,2118.1,54.462 1788,94.803 1850.1,90.896 1975.3,81.367 2080,63 2089.8,61.275 2100.3,58.91 2110.1,56.492"];
	pvacseq -> combined_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1787.7 96.05 1867.59 93.68 2056.36 85.94 2213 63 2224.84 61.27 2237.56 58.8 2249.26 56.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2249.79 58.68 2256.09 54.78 2248.73 53.89 ",
		pos="e,2257.6,54.45 1787.7,96.053 1867.6,93.684 2056.4,85.943 2213,63 2224.8,61.266 2237.6,58.8 2249.3,56.283"];
	pvacseq -> mhc_i_filtered_epitopes	[_draw_="c 7 -#000000 B 7 1787.66 97.49 1885.47 98.16 2150.46 96.47 2368 63 2378.53 61.38 2389.81 58.95 2400.17 56.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2400.59 58.86 2406.78 54.78 2399.4 54.11 ",
		pos="e,2408.2,54.416 1787.7,97.489 1885.5,98.163 2150.5,96.472 2368,63 2378.5,61.379 2389.8,58.954 2400.2,56.439"];
	pvacseq -> mhc_i_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1710.17 94.74 1647.96 90.75 1522.21 81.08 1417 63 1406.89 61.26 1396.07 58.89 1386.04 56.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1386.68 54.11 1379.29 54.81 1385.5 58.87 ",
		pos="e,1377.8,54.446 1710.2,94.745 1648,90.745 1522.2,81.077 1417,63 1406.9,61.263 1396.1,58.893 1386,56.475"];
	pvacseq -> mhc_ii_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1710.22 90.92 1670.96 84.6 1608.57 74.1 1555 63 1545.5 61.03 1535.33 58.72 1525.74 56.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1526.34 54.07 1518.97 54.82 1525.2 58.84 ",
		pos="e,1517.5,54.467 1710.2,90.924 1671,84.604 1608.6,74.097 1555,63 1545.5,61.031 1535.3,58.72 1525.7,56.446"];
	pvacseq -> mhc_ii_all_epitopes	[_draw_="c 7 -#000000 B 4 1726.38 88.58 1703.47 80.05 1667.9 66.81 1642.51 57.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1643.49 55.11 1636.07 54.96 1641.78 59.7 ",
		pos="e,1634.7,54.434 1726.4,88.578 1703.5,80.052 1667.9,66.81 1642.5,57.359"];
	pvacseq -> combined_filtered_epitopes	[_draw_="c 7 -#000000 B 4 1749 88.58 1749 81.52 1749 71.24 1749 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1751.45 62.78 1749 55.78 1746.55 62.78 ",
		pos="e,1749,54.265 1749,88.578 1749,81.523 1749,71.24 1749,62.547"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3635.43 88.58 3625.46 80.63 3610.35 68.59 3598.74 59.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3600.56 57.65 3593.56 55.21 3597.5 61.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3629.5 73.6 0 13 3 -tsv ",
		label=tsv,
		lp="3629.5,75.5",
		pos="e,3592.4,54.265 3635.4,88.578 3625.5,80.632 3610.3,68.59 3598.7,59.338"];
	add_vep_fields_to_table -> annotated_tsv;
	add_tumor_rna_bam_readcount_to_vcf -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3279.97 268.5 3294.43 262.03 3314.53 253.02 3330.57 245.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3331.3 248.19 3336.69 243.1 3329.3 243.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3323.5 253.6 0 13 3 -vcf ",
		label=vcf,
		lp="3323.5,255.5",
		pos="e,3338.1,242.48 3280,268.5 3294.4,262.03 3314.5,253.02 3330.6,245.84"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3515 133.5 3515 152.5 3577 152.5 3577 133.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3546 140.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="3546,143",
		rects="3515,133.5,3577,152.5",
		width=0.86111];
	index -> pvacseq	[_draw_="c 7 -#000000 B 7 3515.31 140.82 3409.32 136.79 3048.85 123.4 2751 116 2383.08 106.86 1939.03 101.22 1795.88 99.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1796.23 97.09 1789.2 99.46 1796.18 101.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3074.5 118.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="3074.5,120.5",
		pos="e,1787.7,99.437 3515.3,140.82 3409.3,136.79 3048.8,123.4 2751,116 2383.1,106.86 1939,101.22 1795.9,99.533"];
	index -> variants_to_table	[_draw_="c 7 -#000000 B 4 3565.76 133.5 3580.82 127.03 3601.76 118.02 3618.47 110.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3619.43 113.09 3624.89 108.08 3617.5 108.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3610.5 118.6 0 13 3 -vcf ",
		label=vcf,
		lp="3610.5,120.5",
		pos="e,3626.3,107.48 3565.8,133.5 3580.8,127.03 3601.8,118.02 3618.5,110.84"];
	index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 7 3547.76 133.79 3550.18 123.07 3554.92 103.8 3561 88 3564.47 78.98 3569.23 69.32 3573.34 61.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3575.26 63.12 3576.44 55.8 3570.95 60.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3567.5 96.1 0 13 3 -vcf ",
		label=vcf,
		lp="3567.5,98",
		pos="e,3577.2,54.467 3547.8,133.79 3550.2,123.07 3554.9,103.8 3561,88 3564.5,78.984 3569.2,69.315 3573.3,61.53"];
	add_transcript_expression_data_to_vcf -> annotated_vcf	[_draw_="c 7 -#000000 B 10 3467.84 181.19 3356.62 171.73 3134.94 151.38 2948 125 2792.01 102.99 2751.19 103.72 2599 63 2593.01 61.4 2586.69 \
59.36 2580.71 57.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2581.65 55 2574.23 54.91 2579.98 59.6 ",
		pos="e,2572.8,54.396 3467.8,181.19 3356.6,171.73 3134.9,151.38 2948,125 2792,102.99 2751.2,103.72 2599,63 2593,61.396 2586.7,59.362 2580.7,\
57.264"];
	add_transcript_expression_data_to_vcf -> index	[_draw_="c 7 -#000000 B 4 3540.35 178.71 3541.18 173.59 3542.28 166.85 3543.29 160.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3545.7 161.06 3544.41 153.76 3540.87 160.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3549.5 163.6 0 13 3 -vcf ",
		label=vcf,
		lp="3549.5,165.5",
		pos="e,3544.7,152.27 3540.3,178.71 3541.2,173.59 3542.3,166.85 3543.3,160.67"];
	add_gene_expression_data_to_vcf -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3392.96 223.5 3422.25 216.58 3463.72 206.79 3494.99 199.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3495.4 201.82 3501.64 197.83 3494.27 197.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3470.5 208.6 0 13 3 -vcf ",
		label=vcf,
		lp="3470.5,210.5",
		pos="e,3503.1,197.48 3393,223.5 3422.2,216.58 3463.7,206.79 3495,199.4"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3263.91 319.4 3284.96 317.05 3304.29 312.76 3311 305 3315.89 299.35 3313.41 294.76 3307.53 291.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3308.73 288.95 3301.35 288.13 3306.61 293.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3319.5 298.6 0 13 3 -vcf ",
		label=vcf,
		lp="3319.5,300.5",
		pos="e,3300,287.48 3263.9,319.4 3285,317.05 3304.3,312.76 3311,305 3315.9,299.35 3313.4,294.76 3307.5,291.09"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3124.06 318.88 3104.58 315.45 3091.53 308.77 3103 296 3105.84 292.84 3116.46 290.22 3130.95 288.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3131.27 290.48 3137.87 287.1 3130.61 285.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3152 298.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="3152,300.5",
		pos="e,3139.4,286.9 3124.1,318.88 3104.6,315.45 3091.5,308.77 3103,296 3105.8,292.84 3116.5,290.22 3130.9,288.05"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3195.93 313.65 3197.67 307.93 3200.76 300.58 3206 296 3208.03 294.22 3210.24 292.63 3212.58 291.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3213.47 293.51 3218.55 288.11 3211.21 289.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3258 298.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="3258,300.5",
		pos="e,3219.9,287.41 3195.9,313.65 3197.7,307.93 3200.8,300.58 3206,296 3208,294.22 3210.2,292.63 3212.6,291.21"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3317.5 313.5 3317.5 332.5 3364.5 332.5 3364.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3341 320.5 0 31 5 -\"RNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"RNA\"",
		pos="3341,323",
		rects="3317.5,313.5,3364.5,332.5",
		width=0.65278];
	default1 -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3338.46 313.55 3336.31 307.79 3332.65 300.43 3327 296 3324.62 294.14 3322.07 292.48 3319.39 291 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3320.79 288.96 3313.42 288.15 3318.68 293.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3354.5 298.6 0 41 9 -data_type ",
		label=data_type,
		lp="3354.5,300.5",
		pos="e,3312.1,287.5 3338.5,313.55 3336.3,307.79 3332.7,300.43 3327,296 3324.6,294.14 3322.1,292.48 3319.4,291"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3546 223.5 3546 242.5 3618 242.5 3618 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3582 230.5 0 56 12 -\"transcript\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"transcript\"",
		pos="3582,233",
		rects="3546,223.5,3618,242.5",
		width=1];
	default2 -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3573.71 223.71 3567.88 217.88 3559.93 209.93 3553.12 203.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3555.02 201.55 3548.34 198.34 3551.55 205.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3584.5 208.6 0 41 9 -data_type ",
		label=data_type,
		lp="3584.5,210.5",
		pos="e,3547.3,197.27 3573.7,223.71 3567.9,217.88 3559.9,209.93 3553.1,203.12"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3450 268.5 3450 287.5 3500 287.5 3500 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3475 275.5 0 34 6 -\"gene\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"gene\"",
		pos="3475,278",
		rects="3450,268.5,3500,287.5",
		width=0.69444];
	default3 -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3468.29 268.65 3463.1 262.78 3455.41 255.25 3447 251 3442.44 248.7 3437.6 246.7 3432.63 244.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3433.58 242.71 3426.17 242.94 3432.11 247.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3479.5 253.6 0 41 9 -data_type ",
		label=data_type,
		lp="3479.5,255.5",
		pos="e,3424.7,242.48 3468.3,268.65 3463.1,262.78 3455.4,255.25 3447,251 3442.4,248.7 3437.6,246.7 3432.6,244.98"];
}